Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3670 |
Symbol | |
ID | 8254801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4381846 |
End bp | 4382775 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937331 |
Product | protein of unknown function UPF0187 |
Protein accession | YP_003093923 |
Protein GI | 255533551 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACTAA AAGAAAATAT ACCGGTAAAA TATATCTTTG GAAAGATTGG TAAGGAAATG CTGATCGTTG CGCTATACGC TGCCTTAATC ACCATGTTAT ACAGCAATTT TCACATTACC AGAATTTCCA TACCTATTGC AGTGCCCACT ATTCTGGGTA CTGTAATTTC ATTGCTGCTG GCTTTTAAAT CCAACCAGGC ATACGATCGC TGGTGGGAAG CCCGTACCAT CTGGGGTGCA GTCGTAAATG ATTCCAGATC GCTGACAAGG CAGTTGCTTA CCTTTGTCGA CAATCCATAT AGTGCCGAAG ATGAGAAAGT CTTTTGCGAA CGTCTTGCAA AAAGACAGAT TGCCTGGTGC TACGCCCTTA GCCGGCACCT GCGCAAACAA GATCCACTGG AAGAGCTTGG CCGGCTCATT AGTAATGATG ATCTGGAGTA TGTAAAAAAC TATACCAACG TACCCCTGGC ACTGCTGGAG CTGCAGGGCA GCGATTTGCG CAATGCCTAT AAGCTGGGCT GGATAAATGA ATACCAGCAG GTACAGATGG ATAAGACGCT TACGGCCTTT TCTAATCAAA TGGGCGGTTG CGAACGCATA AAGAATACAA TTTTTCCGGT GACGTATAGT GTTTATATTC ATTTCTCCAT CATCCTCTTC ATCATGTTGC TGCCCTTCGG ATTGATAGAG TTTTTCAGCT TTGCGACAGT TCCACTGGTT ATTGCCATCG CCTGTTCTTT TTTTCTGATC GAAAAAATGG CCATTCATTT ACAGGACCCT TTTGAGAATA AACCAACAGA TACACCTACA ACCACCATTT GCCGGACTAT TGAAAGGGAC ATTAAACAGA TGCTCAAAGA AAATTACAGG CAGGAAGAAA AGCTGACAGG CTTGCATCTT ACCAAGGCAA AAATGTATTA TATCCTTTAG
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Protein sequence | MLLKENIPVK YIFGKIGKEM LIVALYAALI TMLYSNFHIT RISIPIAVPT ILGTVISLLL AFKSNQAYDR WWEARTIWGA VVNDSRSLTR QLLTFVDNPY SAEDEKVFCE RLAKRQIAWC YALSRHLRKQ DPLEELGRLI SNDDLEYVKN YTNVPLALLE LQGSDLRNAY KLGWINEYQQ VQMDKTLTAF SNQMGGCERI KNTIFPVTYS VYIHFSIILF IMLLPFGLIE FFSFATVPLV IAIACSFFLI EKMAIHLQDP FENKPTDTPT TTICRTIERD IKQMLKENYR QEEKLTGLHL TKAKMYYIL
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