Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3654 |
Symbol | |
ID | 8254785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4368016 |
End bp | 4369008 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937315 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_003093907 |
Protein GI | 255533535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00566269 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTG CAGTAGTTGG TGCTACCGGT CTGGTAGGCA CCGTAATGTT AAAAGTATTA GAAGAGCGTA ACTTCCCGTT AACTGAATTG ATCCCTGTAG CTTCTGAAAA GAGCGTTGGT AAGCAAATCA CGTTCAAGGG TAAGCAGTAC GCTGTTGTAA ACATGGATAC TGCGATTTCG ATGAGACCTG ATATTGCGTT GTTTTCTGCA GGTGGCAGCA CTTCATTGGC TGAAGCCCCT CGTTTTGCTG CGGTAGGTAC TACAGTGATC GACAATTCAT CTGCATGGCG CATGGATCCG TCGAAAAAGC TGATCGTACC TGAAGTAAAT GCCAATGTTT TGTCGGCCGA CGACAAGATC ATTGCCAATC CTAACTGTTC AACTATCCAA ATGGTAGTGG CCTTAAAGCC ACTTCATGAT AAATATAAGA TCAAACGCGT AGTCGTTTCT ACCTACCAAT CCGTTACCGG AACAGGTGTT AAAGCTGTTG ACCAGCTGAT GAACGAGCGT AAAGGTATTA CAGATGGCCC TATGGCTTAT GCCTATCCTA TTGATTTAAA CGTAATCCCT CAGATTGATG TTTTCCAGGA TAACGGCTAT ACCAAAGAGG AAATGAAAAT GATCCTGGAA ACCCAGAAAA TTATGGGCGA TAACAGCATC AGGGTTACGG CAACTACAGT ACGTATCCCG GTAATGGGAG GGCACTCTGA ATCGGTAAAC ATAGAGTTTG AGCATGATTT TGATGTTGCT GAAGTAAAAG ACCTGCTGGC CAATACTGAA GGGGTGATTT TGGTAGACGA CCCGGCAAAC CTGAAATACC CGATGCCTAA AGATGCACAT GAGAAAGATG AAGTATTTGT AGGCAGGATA AGAAGGGATG AATCGTTACC AAATACATTG AATATGTGGA TTGTAGCAGA TAACCTGCGT AAAGGTGCTG CAACAAATGC TGTTCAGATT GCGGAATACC TGGTAAAAGA AGAACTGATA TAA
|
Protein sequence | MKIAVVGATG LVGTVMLKVL EERNFPLTEL IPVASEKSVG KQITFKGKQY AVVNMDTAIS MRPDIALFSA GGSTSLAEAP RFAAVGTTVI DNSSAWRMDP SKKLIVPEVN ANVLSADDKI IANPNCSTIQ MVVALKPLHD KYKIKRVVVS TYQSVTGTGV KAVDQLMNER KGITDGPMAY AYPIDLNVIP QIDVFQDNGY TKEEMKMILE TQKIMGDNSI RVTATTVRIP VMGGHSESVN IEFEHDFDVA EVKDLLANTE GVILVDDPAN LKYPMPKDAH EKDEVFVGRI RRDESLPNTL NMWIVADNLR KGAATNAVQI AEYLVKEELI
|
| |