| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3647 |
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| Symbol | |
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| ID | 8254778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4361201 |
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| End bp | 4362253 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644937308 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003093900 |
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| Protein GI | 255533528 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA TTAAAGGACC GGGTGTATTT TTAGCCCAGT TTATAGGAGA CGAGGCCCCG
TTTAATTCCT TAGATGCGAT ATGCGAATGG GCAGCAGGCC TGGGTTTTAA AGGCATACAG
ATGCCTACCC TGGATGCGAG GTTCATAGAC CTGCAAAAAG CAGCGGAAAG TAAAACTTAT
GCCGATGAAT TAAAAGGCAG GGTAGCTGGA CACGGACTGG AGATCACAGA ATTATCTACC
CATTTACAGG GACAGCTGGT AGCGGTAAAC CCGGCTTACG ACCTTGCCTT TGATGCTTTT
GCACCAGATG CTTACAAAAA CAATCCAAAA GCAAGAACAG AATGGGCGGT ACAGCAACTG
AAATATGCGG CTAAGGCCTC TCAGAACCTT GGCTTAAATG CACATGCCAC TTTTAGCGGT
TCGCTGTTAT GGCATATGTT CCATCCCTGG CCGCAACGCC CGGAAGGGTT GGTGGATGCC
GGTTTTACAG AGCTGGCAAA AAGATGGATG CCCATCCTGA ACGAATTTGA TGCCTGTGGC
GTAGATGTTT GTTATGAGAT CCATCCGGGT GAGGACCTCT TTGATGGCAT CACTTACGAG
ATGTTCCTGG AAAAGGTGAA CAACCATCCC CGCGCCTGTT TGCTTTACGA TCCTTCACAT
TTTGTATTGC AGCAGCTGGA TTACATCCAG TACATAGATT TTTACCATGA GCGCATCAAA
GCCTTCCATG TGAAGGATTC TGAATTTAAC CCCACTGGTC GGCAGGGTAC TTTTGGCGGC
TACCAAAGCT GGGCCAACCG TGCCGGAAGG TACCGTTCGC CGGGTGATGG ACAGGTTGAT
TTTAAGACCA TCTTCAGCAA ACTGGCGCAG TACGATTATA CCGGTTGGGC GGTGATGGAA
TGGGAATGCT GCATCAAGGA TGCGCAGGTA GGTGCAAAGG AAGGAGCAGA ATTTATCCGC
AAGAACATCA TTAAGGTAAC CGACAGGGCA TTTGACGATT TTGCGGCTTC GGGCGGGAAT
GATGATTTTA ACAAGAAGAT CTTAGGCTTA TAA
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| Protein sequence | MKTIKGPGVF LAQFIGDEAP FNSLDAICEW AAGLGFKGIQ MPTLDARFID LQKAAESKTY
ADELKGRVAG HGLEITELST HLQGQLVAVN PAYDLAFDAF APDAYKNNPK ARTEWAVQQL
KYAAKASQNL GLNAHATFSG SLLWHMFHPW PQRPEGLVDA GFTELAKRWM PILNEFDACG
VDVCYEIHPG EDLFDGITYE MFLEKVNNHP RACLLYDPSH FVLQQLDYIQ YIDFYHERIK
AFHVKDSEFN PTGRQGTFGG YQSWANRAGR YRSPGDGQVD FKTIFSKLAQ YDYTGWAVME
WECCIKDAQV GAKEGAEFIR KNIIKVTDRA FDDFAASGGN DDFNKKILGL
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