| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3645 |
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| Symbol | |
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| ID | 8254776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4358333 |
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| End bp | 4360036 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937306 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003093898 |
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| Protein GI | 255533526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.948951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT TAAATACTAA AGCAACTGCG CAGAACACTT ATGATGCGAT TGTTGTAGGA
TCTGGGATTA GCGGCGGCTG GGCAGCAAAA GAACTGACAG AAAAAGGTTT AAAAGTTTTA
CTGCTGGAAA GAGGCAGAAA CATTGAACAT ATAAAAGATT ATACCACGGC CATGAAAAAG
CCCTGGGAAT TTGAACACAG GGGTAAACTG ACTGAAGAAC AGAAGGCCAC GCACCCTGTA
CAGAAAAGAG ACTATCCTTA TACAGAATTT AACGAAAGCT TTTGGGTGAA CGACCTGGAA
TGCCCTTATA CAGAGGTAAA GCGTTTCGAC TGGTACCGTG GCTTTCATGT GGGTGGCAAA
TCACTGATGT GGGGCCGTCA GAGCTACCGC TTCAGCGACC TGAACTTTGA GGATAACCTG
AAAGACGGAC ATGGGGTAGA CTGGCCGATC CGCTACAAGG ACATTGCGCC ATGGTACGAT
TACGTGGAGA AATTTGCCGG GATAAGCGGA CAGGCAGAAG GCTGGCCGGC ATTACCTGAC
GGACAGTTTT TACCGCCCAT GGAAATGAAC TGCGTAGAGA AAGAGGTAAA AAAACGAATT
GAAGCCAAAT GGAACAAATC AAGGATCATG ACCATTGGCC GCACGGCGAA CCTTACGGTA
CCCCACGGCG GACGTGGCAG TTGCCAATAC CGCAACCTGT GTAGCAGGGG CTGTCCTTTT
GGTGCTTACT TTAGTACCCA ATCATCTACC CTTCCGGCGG CTGTGGCTAC CGGAAACTTA
ACACTTCGTC CTTTTTCGCT GGTAAATACC ATCATTTACG ATAAAGAAAC ACAAAAAGCA
AAAGGCGTGG TTGTGATCGA TTCCGAAACC AAAGAAACGA CAGAATACTT TGCAAAGATT
GTATTTGTAA ACGGCTCTAC ACTTGCCTCG ACCTTCATTT TATTGAATTC TGTATCTGAT
GAACATCCCA ACGGATTGGG CAATGGCAGC GGACAGCTGG GCCATAATTT AATGGACCAC
CATTTCCGTT GCGGTGCCAA CGGGCGGATT GAAGGTTTTG ACGATAAATA TACTTACGGC
AAACGGGCCA ATGGCATTTA CATTCCGAGG TATCGGAACA TGGGCAATGA TAAACGTGAC
TATGTGAGGG GCTTTGGTTA CCAGGGCGGC GGAAGTAGAG GTAACTGGCA TGCCGATGTA
GCAGAAATGG CTTTCGGTGG CGAGTTTAAA GACCAGATGA CCGTACCTGG CTCCTGGAAT
ATGGGCCTGG GTGGTTTTGG TGAATCGCTC CCTTATTTTG AAAACAGGGT GTATATCGAT
AAGAGCAAGA AAGACAAATG GGGACAACCT GTACTGGCCA TTGATTGCGA GTTTAAAGAT
AACGAACGTA AAATGCGGGT AGACATGATG AACGATGCCG CTGAAATGCT GGAGGCATCT
GGTGCAAAAG ATGTTAAAAC TTTTGACAAT GGCTCGGCAC CGGGCATGGC CATTCATGAA
ATGGGTACGG CACGTATGGG CCACGATCCT AAAACATCTA TACTGAACAA ATGGAACCAG
ATGCACGAAG TAAAAAATGT TTTTGTAACA GATGGTTCAT GTATGGCCTC TGCTGCCTGT
CAGAACCCAT CATTAACATA TATGGCTTTA ACTGCAAGGG CGTGTGATTT TGCAGTTAGT
GAATTAAAAA AAGGTAACCT TTAA
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| Protein sequence | MSNLNTKATA QNTYDAIVVG SGISGGWAAK ELTEKGLKVL LLERGRNIEH IKDYTTAMKK
PWEFEHRGKL TEEQKATHPV QKRDYPYTEF NESFWVNDLE CPYTEVKRFD WYRGFHVGGK
SLMWGRQSYR FSDLNFEDNL KDGHGVDWPI RYKDIAPWYD YVEKFAGISG QAEGWPALPD
GQFLPPMEMN CVEKEVKKRI EAKWNKSRIM TIGRTANLTV PHGGRGSCQY RNLCSRGCPF
GAYFSTQSST LPAAVATGNL TLRPFSLVNT IIYDKETQKA KGVVVIDSET KETTEYFAKI
VFVNGSTLAS TFILLNSVSD EHPNGLGNGS GQLGHNLMDH HFRCGANGRI EGFDDKYTYG
KRANGIYIPR YRNMGNDKRD YVRGFGYQGG GSRGNWHADV AEMAFGGEFK DQMTVPGSWN
MGLGGFGESL PYFENRVYID KSKKDKWGQP VLAIDCEFKD NERKMRVDMM NDAAEMLEAS
GAKDVKTFDN GSAPGMAIHE MGTARMGHDP KTSILNKWNQ MHEVKNVFVT DGSCMASAAC
QNPSLTYMAL TARACDFAVS ELKKGNL
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