| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3638 |
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| Symbol | |
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| ID | 8254769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4351675 |
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| End bp | 4353975 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937299 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003093891 |
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| Protein GI | 255533519 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.456784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG CTAACTTATT TATCCTTACG CTCATTTTTA CTGCCCATAT AACTTTTGCC
CAAACCAAAA AAACGGGCAA AGCTACCCAT CAGCAAATGA ATACCTTCAT CAGTAACCTG
ATGTCAAAAA TGACATTAGA CGAAAAGATC GGGCAGCTAA ATCTGCTTAC CGGTGGCGAA
GCTACTACGG GCTCGGTAGT AAGCACCGAT GTAGAAAGTA AAATCAAGAA AGGACAGGTA
GGAGGTATTT TTAGCTTAAC CACCCCTGCA CGCATCCGTA AGGCCCAGGA AATAGCCGTT
AATCAGACCC GGCTCAAAAT ACCTATCATA TTTGGTCAGG ATGTGATCCA TGGATACAAA
ACTACTTTCC CTATTCCGCT GGCCTTATCC AGTACCTGGA ACATGGAAAT GATCAAAAAA
ACAGCCCGGA TTGCCGCCAT AGAAGCTACA GCAGATGGGC TGAACTGGAC CTTCTCGCCC
ATGGTCGATA TTTCCAGGGA CCCCCGCTGG GGCCGTATTT CTGAAGGTTC AGGAGAAGAC
ACCTATCTGG GCTCAGAAAT TGCCAGGGCC ATGGTAAAAG GCTACCAGGG TGATGACCTT
GCTAAATACA ATACCATGAT GGCCTGTGTA AAACATTTTG CTTTATACGG GGCGTCAGAA
GCGGGCAGAG ACTACAATAC CACGGATATG AGTCTGGATC GCATGTATAA TGAATACTTG
CCGCCCTATA AAGCTGCGCT TGATGCGGGC GCAGGCAGTA TCATGACCTC CTTTAACGAC
ATCAATGGAG TGCCTGCCAC TGCAAACAAA TGGCTCATGA CTGATCTTTT GCGTAAAGAA
TGGGGGTTTA AAGGTCTTGT GGTTACCGAC TATACTGCGG TTAACGAGCT GATAGACCAT
GGCCTGGGCG ATCTGAAAGC CGTATCGGCC CTGTCCATTA ACGCAGGTGT AGACATGGAC
ATGGTTGGCG AAGGCTTTTT AACCACCCTG AAAAAATCTG TACAGGAAGG CAAAGTAAAA
GCACAACGCA TTGATGAAGC CTGCAGATTG GTTTTAGAGG CCAAATATAA GCTGGGCTTA
TTTGACGATC CTTTCCGTTA TTGCAATGAA GAAAGGGCTA AAACGGAAAT TTTAAAACCT
GAACACCTTG CTTTTGCCCG AGAGGTAGCT GCCGAATCTT TTGTGCTTCT GAAAAATGAA
AACCAGACCT TGCCCCTTAA AAAAACGGGT ACCATAGCTT TAATAGGCCC CCTGGCCAAT
ACAGGGGCCA ATATGCCTGG TACCTGGAGT GTAAACAGCG ACCTGGCCAA TACCGCCTCT
CTTTTAACAG GCATGAAGGC CGTTTTGGGC AAACAGGTAA AAGTGGTACA CTGCCTGGGT
TCAAACCTGG TAACAGATGA GGCCTACCAG CAGCGTGCCA CCATGTTTGG CCGCGACATT
CCAAGAGACA ACCGCCCTGA AGCAGAAGTG ATAAAAGAAG CTGTGGAACT GGCCAAAACT
GCAGATGTAG TTATTGCTGC ATTAGGTGAA AGTTCTGAAA TGAGCGGCGA AGCCTCCAGC
CGTACCAACC TGGAAATCCC GGAAGTTCAG CAGCGTTTGT TACAAGCCCT GTTAAAAACA
GGTAAACCTG TTGTACTGGT CTTGTTTACC GGCAGGCCAC TGGTACTGAA CTGGGAGCAG
CAAAACGTAC CGGCCATTTT AAATGTCTGG TTTGGTGGTA CAGAAACGGC AAAAGCAATA
ACTGATGTAC TGTTTGGCGA TGTGAACCCT TCGGGAAAAT TAACAGCCAC CTTCCCGCAA
AATGTGGGGC AGATTCCCTT ATATTATGCG CATAAAAATA CCGGCAGGCC ATTGGCAGAT
GGAAAATGGT TCAGTAAGTT CCGCTCCAAC TATCTGGACG TAAGCAACGA ACCCCTATAC
CCTTTCGGTT ACGGCCTAAG CTATACCAGT TTTGCCTACA GCAATTTAAG GTTAAGTAAA
AACAGCTTTA AACCTGGTGA ATCTATTACC GCCAGCATCG ATATTAAAAA CATCGGTTCA
AGGGAGGGCA AGGAAGTGGT ACAATTGTAC ATACGCGACC TGGTGGGCAG TTCTACCCGT
CCGGTTAAAG AACTAAAGGC TTTCCAAAAG ATCAGCCTAA AACCCGGAGA AAGCAAAACT
GTGAGCTTTA AGCTGACCGA AAATGATTTG AAGTTCTATA ATACGGCTTT AAGGTTTGTT
GCCGAACCCG GTGATTTTAA CTTGTTTATT GGCGGAAATT CCAGAGATGT GCTGGAAACG
AAGTTTAGTT TAAGAAATTA A
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| Protein sequence | MKIANLFILT LIFTAHITFA QTKKTGKATH QQMNTFISNL MSKMTLDEKI GQLNLLTGGE
ATTGSVVSTD VESKIKKGQV GGIFSLTTPA RIRKAQEIAV NQTRLKIPII FGQDVIHGYK
TTFPIPLALS STWNMEMIKK TARIAAIEAT ADGLNWTFSP MVDISRDPRW GRISEGSGED
TYLGSEIARA MVKGYQGDDL AKYNTMMACV KHFALYGASE AGRDYNTTDM SLDRMYNEYL
PPYKAALDAG AGSIMTSFND INGVPATANK WLMTDLLRKE WGFKGLVVTD YTAVNELIDH
GLGDLKAVSA LSINAGVDMD MVGEGFLTTL KKSVQEGKVK AQRIDEACRL VLEAKYKLGL
FDDPFRYCNE ERAKTEILKP EHLAFAREVA AESFVLLKNE NQTLPLKKTG TIALIGPLAN
TGANMPGTWS VNSDLANTAS LLTGMKAVLG KQVKVVHCLG SNLVTDEAYQ QRATMFGRDI
PRDNRPEAEV IKEAVELAKT ADVVIAALGE SSEMSGEASS RTNLEIPEVQ QRLLQALLKT
GKPVVLVLFT GRPLVLNWEQ QNVPAILNVW FGGTETAKAI TDVLFGDVNP SGKLTATFPQ
NVGQIPLYYA HKNTGRPLAD GKWFSKFRSN YLDVSNEPLY PFGYGLSYTS FAYSNLRLSK
NSFKPGESIT ASIDIKNIGS REGKEVVQLY IRDLVGSSTR PVKELKAFQK ISLKPGESKT
VSFKLTENDL KFYNTALRFV AEPGDFNLFI GGNSRDVLET KFSLRN
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