| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3634 |
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| Symbol | |
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| ID | 8254765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4346071 |
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| End bp | 4347597 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937295 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093887 |
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| Protein GI | 255533515 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.623243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TTAACAATAA AAATTTCTGT CTGATGCTTT TTAGTATCGC AGCAATTACC
TTACTGGCGA GTTGTAAAAA AAGCTTCCTG GATCGCGATC CACAAGGAAC ATACACTTCC
GACACCTATC CCTATCCTAA AGGATCAGGT CCATTTGATT CGGAAATATT TGCCACCTAT
GACATCCTGC GCTCATATGA TGCCTCTGGA AGCGGATTTA TTGCTGCAAC CGGTATCAGA
AGTGACGATG CTGATAAAGG CAGTACACCT ACCGATGGCC CTACCTCACT TGAAATGGAC
AATTTCAACA TTACCACCAG TAATGTCCTG GCAAATGATC TTTGGAGAGG CTACTTCAAT
ATCGTAAACA AGAGCAATAT TGTGCTGGAT AAGGTAGCTA AAGATCTTGA CCCGGGCACA
CCAGCAGAAT CAAAAGTATT TGCAGAAGCA GAAGCTAAAT TTTTGCGTGG CTATGCCTAT
TTCATGCTGG TACGCTTATT TGGCAGGGTG CCCCTGATAG ACAAAGTATT TGATGATCCC
GTTGCCCAAT CTAACGTTGC CCAAAGTGAA CCGGCCGCTA CCTATACCTT AATTGAAAGT
GACCTGCAGT TTGCCGGAAC CAACCTGCCC TTAAGCTGGG ATCCAAGCAA GTTTCCCGGA
CGAGCAACCA GAGGTGCGGC GAACGGCTTA CTGGCCAAAG TATACCTTAC CCGTCAAAAC
TGGGCAGCTG CCCAAAGTGC CGCTAACCTG GTTATTACCT CACAACAGTA CAACCTAAGC
ACTCCATATG ATGATATTTT TAAAGAAACA GGTGAAAACA GTAAAGAATC TGTATTCGAA
ATTCAGGCAA CAGCTAACCT GACGGAAAAA AGAAGTTTCG GAAGCCAGTT TGCAAGTATC
CAGGGTGTAA GGGGAACAGG TATCTGGAAC CTTGGCTGGG GCTTTAATAT CCCAAGTCCA
CAACTCGAAG GTACTTATGA AACCGGCGAT CCACGTAAAG CCAGAACCAT TTTATACGCC
GGAGGCACCT CAGTTTTTGG TGAAGTTGTT CCTACCGGTT TACCAAATAC CAGGTACAAC
CACAAAGTAC ACAGTAATCC TGCAACGCGA AATGCACTGC TTGACAATTT CAGCTATTGG
ATGAACATCC GGATCCTGCG TTATGCAGAT GTATTACTGA TGTATGCAGA AGCTGCAAAT
GAAGTAGGTG GCACCGCAAA TACCACTGCT GCGCTAGATG CATTGAACAG TGTAAGAAAA
AGAGCAAGAG GAACAACTCC GGGTATTTTA CCAGACATCA CGGTAACTGA TCAGGCGCAG
CTGCGCGAGA TCATCCGCCA CGAAAGAAGG GTTGAGCTAG CCATGGAACA TGAGCGTTTC
TTTGACCTGG TACGCTGGGG CATTGCCGGA CAGGTACTGC AAAATGCAGG GAAAAATTTC
GTTACCGGCA AGCACGAACT CTTACCTATC CCTTTTGCAC AGATAGAGAT CAGCAAGGGT
GTATTGAAAC AAAATTTTGG TTATTAA
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| Protein sequence | MKTFNNKNFC LMLFSIAAIT LLASCKKSFL DRDPQGTYTS DTYPYPKGSG PFDSEIFATY
DILRSYDASG SGFIAATGIR SDDADKGSTP TDGPTSLEMD NFNITTSNVL ANDLWRGYFN
IVNKSNIVLD KVAKDLDPGT PAESKVFAEA EAKFLRGYAY FMLVRLFGRV PLIDKVFDDP
VAQSNVAQSE PAATYTLIES DLQFAGTNLP LSWDPSKFPG RATRGAANGL LAKVYLTRQN
WAAAQSAANL VITSQQYNLS TPYDDIFKET GENSKESVFE IQATANLTEK RSFGSQFASI
QGVRGTGIWN LGWGFNIPSP QLEGTYETGD PRKARTILYA GGTSVFGEVV PTGLPNTRYN
HKVHSNPATR NALLDNFSYW MNIRILRYAD VLLMYAEAAN EVGGTANTTA ALDALNSVRK
RARGTTPGIL PDITVTDQAQ LREIIRHERR VELAMEHERF FDLVRWGIAG QVLQNAGKNF
VTGKHELLPI PFAQIEISKG VLKQNFGY
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