| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3618 |
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| Symbol | ispH |
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| ID | 8254749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4326113 |
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| End bp | 4326961 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937279 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003093871 |
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| Protein GI | 255533499 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.57599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATACA ATTTAGCTGT AACAATAGAT AAAGCATCCG GCTTTTGCTT TGGGGTAGTT
TATGCTATTG ATATGGCTGA GGATATCCTG GACAATGAGG ATTATCTGTA TTGCCTTGGA
GATATTGTAC ACAATGATGA AGAGGTTAAA CGGCTAACTG ATAAAGGTCT GCGGATAATA
GACCATGAGC AGTTGAAAGG TTTGTACAAA GAGAAGGTAT TGATCCGTGC ACATGGAGAG
GCCCCGGCCA CTTATGAACT GGCCCTTCAA AATGGGCTTA CCCTGATCGA TGCTTCCTGT
CCTGTTGTAT TAAAATTACA GAACAGGATA AAGAACTCAC ATGATGAAGA AGAGCAGATC
CTGATATTTG GAAAGCATGG TCATGCCGAG GTAATTGGCC TGCAGGGTCA AACAGATGGT
AAAGCGATCG TATTTCAGGA TATAGCAGAG CTTGACGAGG TGAAGCTGCC CCAAAAATTT
ACTTTATACA GCCAGACTAC TAAAAGTACC GATAAGTTTT ATAGCATTAA AGAGGAACTG
ATTGGCCGCG GTTACGATGT GAAGGCAAAC GATACGATAT GCAGGCAGGT ATCCAACCGT
TACGGCGATC TGGAAAAGTT TGTAGCTGAA TATGATAAAA TCCTGTTTGT GTCGGGCAAA
AAATCTTCAA ATGGCAAGGT GTTATACGAT GTGTGCAAAA AATACAATGA CAATTCCTAT
TTTATTTCCA ATACAGAAGA AATAGACAAG GAATGGTTTA GTCCTGGCGA CAAAGTGGGC
ATTTGCGGGG CTACCTCTAC GCCAATGTGG CTGATGGAAC AGGTGAAGGC CGAATTGTTA
ACTTACTGA
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| Protein sequence | MKYNLAVTID KASGFCFGVV YAIDMAEDIL DNEDYLYCLG DIVHNDEEVK RLTDKGLRII
DHEQLKGLYK EKVLIRAHGE APATYELALQ NGLTLIDASC PVVLKLQNRI KNSHDEEEQI
LIFGKHGHAE VIGLQGQTDG KAIVFQDIAE LDEVKLPQKF TLYSQTTKST DKFYSIKEEL
IGRGYDVKAN DTICRQVSNR YGDLEKFVAE YDKILFVSGK KSSNGKVLYD VCKKYNDNSY
FISNTEEIDK EWFSPGDKVG ICGATSTPMW LMEQVKAELL TY
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