| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3610 |
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| Symbol | |
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| ID | 8254741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4317371 |
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| End bp | 4318603 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937271 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003093863 |
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| Protein GI | 255533491 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.411205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATA CCGAAAACGT ACGACTAGCT ATACAATCCA TTACCAGCAA CCGGTTACGC
ACCATGCTCA CGGCATTGAT CATTGCCATT GGTCTCTCGG CCCTGGTAGG GATATTAACC
ACACTTGATG CGGTAAAAAA GAGTATGACA GAAGCGTTTT CGAGCATGGG GGCAAATTCC
TTTAACATCA GAAACCGTGG TACTGGAATC AGGATAGGGG GCTCCGGACA AAGGCAAAAA
CCTTTTAAAT CTATACGTTA TGAGGATGCG CTGGCTTTTA AAGAACGGCT GAATACACCG
GCCAAGGTTG CTGTAAGTGT AGTAGCCACC CGCGGGGCAA CCGCTAAATT TGGCGCAGAA
AAAACAAATC CAAACATCAA CATTCAGGGC ATAGATGAAA ACGGGTTAAA TTCCCAGGGC
CTGGAACTGG CTTTGGGCCG CAATTTTAGC TTAACTGAAG CGCAGTCGGG CAATAATGTT
TGTATTATAG GTAGTGAGAT CAGTGCTAAA CTGTTTAAAA ACCAAAGTCC TTTAGATAAG
ATCATCAATG TAGGCAATAC CAGGCTTAAG GTAATCGGGG TATTGGTATC TAAGGGTCAG
AGCATGGGTT TTAGTGGCGA CCGCTCTATA TATGTGCCGC TGTTAAAAGC AAAACTGATC
AATTCCAGCT CAAATCCTTC TTATACGATT ACAGTAATTG TTCCGAATAA TGACATTATG
GACAATGTAA TTGGCGAAGC TACTGCCCAG TTTAGAAATA TACGGAAGGT AAGGGTTACA
GACCCCAACA ATTTTGAAAT TACCAAGAGT GATGCCATGG CACAAACACT TTTTGAAAAT
TTAAGATACA TTGTCTGGGG TGGAATTGCC ATTGGGGTCA TTACGTTAAT AGGTGCTTCT
ATAGGATTGA TGAACATTAT GCTGGTCTCG GTAACTGAAC GGACAAGGGA AATCGGCATT
CGTAAAGCTA TAGGTGCCAA TCCTGCCGTC ATCCGCAAAC AGTTTCTGAT AGAGGCTGTA
ATGATCTGCC TAATGGGTGG TACCTTTGGT ATATTTCTGG GCATTGCCAT AGGCAACCTG
ATATCGCTGG CCATGAGCGG GTCCTTTATT ATCCCCTGGC TATGGATTTT TGGTGGCTTT
GCCCTATGTG TGCTGGTGGG AATAATTTCG GGATATTATC CCGCAAAAAA AGCCTCCAAA
CTGGATCCGG TAGAGGCTTT AAGATATGAA TAA
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| Protein sequence | MTYTENVRLA IQSITSNRLR TMLTALIIAI GLSALVGILT TLDAVKKSMT EAFSSMGANS
FNIRNRGTGI RIGGSGQRQK PFKSIRYEDA LAFKERLNTP AKVAVSVVAT RGATAKFGAE
KTNPNINIQG IDENGLNSQG LELALGRNFS LTEAQSGNNV CIIGSEISAK LFKNQSPLDK
IINVGNTRLK VIGVLVSKGQ SMGFSGDRSI YVPLLKAKLI NSSSNPSYTI TVIVPNNDIM
DNVIGEATAQ FRNIRKVRVT DPNNFEITKS DAMAQTLFEN LRYIVWGGIA IGVITLIGAS
IGLMNIMLVS VTERTREIGI RKAIGANPAV IRKQFLIEAV MICLMGGTFG IFLGIAIGNL
ISLAMSGSFI IPWLWIFGGF ALCVLVGIIS GYYPAKKASK LDPVEALRYE
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