Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3604 |
Symbol | |
ID | 8254735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4311687 |
End bp | 4312466 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644937265 |
Product | protein of unknown function DUF477 |
Protein accession | YP_003093857 |
Protein GI | 255533485 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT CAATCATAGC CTTTTTACTT ATTTTATTCG CTACAGCGGG CTTTGCTCAG GACTTTCCGG CGAAGCCCAA TACCCTGGTC AACGATTATA CCGGGACACT TTCTGCAGAT CAGCTGCAAA ATCTGGAACG TAAGCTGGTT GCTTTTGACG ATTCAACCTC TATCCAGGTG GCTATAGCGG TACTCAAGTC CGTGGGCGAA TACGACATCA ATGAATATGC GCTGGAACTA GGCAGAAAAT GGGGAGTAGG CACCAAGGGC AAGGACAATG GTGTAATGAT TGTAGTTGCG CTGGGCGACC GAAAAATAGC CATCCAGACG GGCTATGGCG TTGAGGGTGT ATTGCCAGAT ATGTATACCC GGCGAATCAT TGACAATGAA ATTAAACCTT ATTTTAAGGC AGGTGATTAT TATAGGGGCC TGGATGCAGG AACCGATGCC ATCATCAGCG TAACCAAGGG TGAATATAAA AACGATAAAC CTAAAGCTGG TAAAACCGGT AGCGGCGCTT CAGGTGTACT GATCATTATC ATTATTGTGG TGGTCGTAAT TATTGTGCTG AAAAGAGGCG GTGGCGGTGG CGGTGGCAGT CAGGTTATTG GTGGCCGTGG TGTTGCCGAC GCACTGTTCT GGAGTATGCT GCTGGGCGGC GGAAGAAGTT CAGGCGGTGG TGGAGGCGGC TGGGGTGGCG GCAGTAGCGG CGGCGGCGGT GGCTTCGGTG GTTTTGGCGG CGGTAGTTTT GGCGGTGGCG GAAGCAGCGG CAGCTGGTAA
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Protein sequence | MKKSIIAFLL ILFATAGFAQ DFPAKPNTLV NDYTGTLSAD QLQNLERKLV AFDDSTSIQV AIAVLKSVGE YDINEYALEL GRKWGVGTKG KDNGVMIVVA LGDRKIAIQT GYGVEGVLPD MYTRRIIDNE IKPYFKAGDY YRGLDAGTDA IISVTKGEYK NDKPKAGKTG SGASGVLIII IIVVVVIIVL KRGGGGGGGS QVIGGRGVAD ALFWSMLLGG GRSSGGGGGG WGGGSSGGGG GFGGFGGGSF GGGGSSGSW
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