Gene Phep_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3604 
Symbol 
ID8254735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4311687 
End bp4312466 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content51% 
IMG OID644937265 
Productprotein of unknown function DUF477 
Protein accessionYP_003093857 
Protein GI255533485 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CAATCATAGC CTTTTTACTT ATTTTATTCG CTACAGCGGG CTTTGCTCAG 
GACTTTCCGG CGAAGCCCAA TACCCTGGTC AACGATTATA CCGGGACACT TTCTGCAGAT
CAGCTGCAAA ATCTGGAACG TAAGCTGGTT GCTTTTGACG ATTCAACCTC TATCCAGGTG
GCTATAGCGG TACTCAAGTC CGTGGGCGAA TACGACATCA ATGAATATGC GCTGGAACTA
GGCAGAAAAT GGGGAGTAGG CACCAAGGGC AAGGACAATG GTGTAATGAT TGTAGTTGCG
CTGGGCGACC GAAAAATAGC CATCCAGACG GGCTATGGCG TTGAGGGTGT ATTGCCAGAT
ATGTATACCC GGCGAATCAT TGACAATGAA ATTAAACCTT ATTTTAAGGC AGGTGATTAT
TATAGGGGCC TGGATGCAGG AACCGATGCC ATCATCAGCG TAACCAAGGG TGAATATAAA
AACGATAAAC CTAAAGCTGG TAAAACCGGT AGCGGCGCTT CAGGTGTACT GATCATTATC
ATTATTGTGG TGGTCGTAAT TATTGTGCTG AAAAGAGGCG GTGGCGGTGG CGGTGGCAGT
CAGGTTATTG GTGGCCGTGG TGTTGCCGAC GCACTGTTCT GGAGTATGCT GCTGGGCGGC
GGAAGAAGTT CAGGCGGTGG TGGAGGCGGC TGGGGTGGCG GCAGTAGCGG CGGCGGCGGT
GGCTTCGGTG GTTTTGGCGG CGGTAGTTTT GGCGGTGGCG GAAGCAGCGG CAGCTGGTAA
 
Protein sequence
MKKSIIAFLL ILFATAGFAQ DFPAKPNTLV NDYTGTLSAD QLQNLERKLV AFDDSTSIQV 
AIAVLKSVGE YDINEYALEL GRKWGVGTKG KDNGVMIVVA LGDRKIAIQT GYGVEGVLPD
MYTRRIIDNE IKPYFKAGDY YRGLDAGTDA IISVTKGEYK NDKPKAGKTG SGASGVLIII
IIVVVVIIVL KRGGGGGGGS QVIGGRGVAD ALFWSMLLGG GRSSGGGGGG WGGGSSGGGG
GFGGFGGGSF GGGGSSGSW