Gene Phep_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3603 
Symbol 
ID8254734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4311240 
End bp4311683 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content42% 
IMG OID644937264 
Productprotein of unknown function DUF477 
Protein accessionYP_003093856 
Protein GI255533484 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATAT TTTCAGAACA AGACCAGGAG CTCATTGCAA ATGCAATTGC AGAGGCCGAA 
AAAGGTACAT CAGGCGAAAT CAGAATAGCC GTAGAAAAAC ATTGCAGTGG CGATGCTATT
GAACGCGCGA CTTCTTATTT TGCGAAGTTG GGCATGGATA AAACAGCAAA ACACAATGGT
GTGCTGATCT ATCTGGCTTA TATTGACCAT AAATTTGCGA TAATTGGCGA CAGTGGCATT
AACAAAGTAG TGCCCTCCGA CTTCTGGGAA ACTACTCAGA TTGCCATGAA AGCACATTTT
GCAGGCGGCA ATATTGTGCA GGGAATTATA GCCGGTATAG TACTGGCAGG CGAAAAACTG
GCCTTATATT TCCCATTTGA AGGAGATGAC ATCAATGAGC TGCCCAATGA AATTATTTTT
ATGGACCAAC ACAAAACAAA TTAG
 
Protein sequence
MGIFSEQDQE LIANAIAEAE KGTSGEIRIA VEKHCSGDAI ERATSYFAKL GMDKTAKHNG 
VLIYLAYIDH KFAIIGDSGI NKVVPSDFWE TTQIAMKAHF AGGNIVQGII AGIVLAGEKL
ALYFPFEGDD INELPNEIIF MDQHKTN