Gene Phep_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3599 
Symbol 
ID8254726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4300953 
End bp4302074 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content41% 
IMG OID644937256 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003093852 
Protein GI255533480 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATC GCATTAACTC GGACCGAAAT AAACCCTGGA ACGATTTACC CGATCTTCCT 
TTAGACCCTA AGCTTTATGA AGACCTGGAA ATCTATAGCC AGCTTGGCAA TGCAAAAGCG
GCACTGGGCA GATTGCAGGG AAGAAGTATA GCCATACCCA ATCAGGGCTT GCTGATCAAC
TCTATCAGTT TACAGGAGGC TAAGGCTTCC AGTGCAATTG AAAATATATT TACTACAGAT
GATGAACTGT ATAAAGCCTA TAGTGAGGAC CAGGCAAAAC AGCTGGATGG GCCGGCAAAG
GAAATCCTTA ATTACAGGGA AGCTTTATGG CTGGGTTATC AATATTTACA GGAAAACCAG
ATTTTCGATG CACACTATTT TATAAAAATG TACAGGGTAG TTAGCCAGTT TAATGATGGC
ATAAGAACAC CCATTGCCCA GATATACATT AAAGAAGGTG GTACTGGGCC AAATGCAGGG
AAGGCATTTT ATACCCCGCC CAGGGGCAAG GGAATCATTG AAGATAAACT GAACAACTTA
ACCGATTTTT TGAATGATGA TCAAAAGTAT CCCTTAGATC CCTTACTGAA AATGGCCATC
GGACATTTTC AGTTCGAAGC TATACATCCT TTCAGGGATG GAAATGGGCG AACGGGCAGA
ATTTTTAACA TTCATTATCT GACCAAAAAA GGCTTGCTGG ATTATCCTAT TTTATTCCTG
AGCAGCTATA TTATGGAACA TAAAGAGGAA TATTATGCCG GACTGGCGGG AGTTACACAA
AGGGGGAACT GGAAAAGCTG GTTGTTATAT ATATTAAAGG CTGTTGAAGT AACTTCTAAC
CTTACCTACA ATAAAATCAA TGACATCATA TCAGCTAAAG AAGCCATCCT TGATGCTATT
GTTGAAGATG GAAATATTTC CAGGCCTGAA TCTCTGGTCA ATGCTTTGTT TACGCAGCCC
TTTACCAGGG TAAAACATTT CACCAATTCG GGATTGTATT CGGAAAATAC GGCAAGAAAG
TATTTGGACC AACTGGCCAA CATGGGTATT CTTGAAAAAA GAATGATCCA GGGCGGAAGT
TATTACCTGA ATCTGGAACT CTACAGGATA CTTTCTGAAT GA
 
Protein sequence
MTYRINSDRN KPWNDLPDLP LDPKLYEDLE IYSQLGNAKA ALGRLQGRSI AIPNQGLLIN 
SISLQEAKAS SAIENIFTTD DELYKAYSED QAKQLDGPAK EILNYREALW LGYQYLQENQ
IFDAHYFIKM YRVVSQFNDG IRTPIAQIYI KEGGTGPNAG KAFYTPPRGK GIIEDKLNNL
TDFLNDDQKY PLDPLLKMAI GHFQFEAIHP FRDGNGRTGR IFNIHYLTKK GLLDYPILFL
SSYIMEHKEE YYAGLAGVTQ RGNWKSWLLY ILKAVEVTSN LTYNKINDII SAKEAILDAI
VEDGNISRPE SLVNALFTQP FTRVKHFTNS GLYSENTARK YLDQLANMGI LEKRMIQGGS
YYLNLELYRI LSE