Gene Phep_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3589 
Symbol 
ID8254711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4273906 
End bp4276680 
Gene Length2775 bp 
Protein Length924 aa 
Translation table11 
GC content42% 
IMG OID644937241 
Producthypothetical protein 
Protein accessionYP_003093842 
Protein GI255533470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.368202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGA ATGGGCAAAA GACAACTGAC AGTAAGGGGT TTAAAATGAG CTCAAAGGGT 
AAAACGTACC TGTTTAAACC CGATTTTGTA GTAATCTGCA ACGAAAAAGA TCCAGAGCTG
GCATTAAAAC CCTCAGGGTT AAAAAAAGTT TCCTACAATG TCCCAACCTG GAAAACAAGT
GATCCTAACC TGGCTGATTA TCATCAGCAG TCAGTTAGCG CCAGTGTTGC CGGCGATGGA
TTTGATGATA AAATATTGAG GAGTGCAAAG CAAGATAGAA CAGCCAATAT CTATCATGCA
GGAAAAACAT ACTTTCTTAC TGCAACCAAA ACAGTAAATT CCGGTGATTC CATCTGCTTT
ATCTTTCCGG AACATGCCAT GTTCAGGCTA AAGGCATGGA TCATCAAAAG TGGTACACCT
TATCCCAGGA TAGAATTTTT ATTTATACCT AAAAAAGACG GCTTTTATAG TGTAGGGTAT
ATTGGGGCAC CCTCTTTTAA AAATGGTGAT GTTGATGAAC TATGGCAGCC GCTGATCTGG
ACAGAAAAAA GGGCTCCATT GCAACCCTAT CTTACCGCGT CTTTTATGGC AACAATACCC
ACTACGCTGG TAAATGACGG GAACAATTCA ATAGGCGTAC TGACAGCTTC CAGGTATTTG
CCTTTTCAGC CCTTGCCGCT GCTAAGTAAC AGCCAGTTTG GAATTGCATT GCTGAATGAC
AGATCTGAAT TACAGCCCCA GGTTTTTGCC CCTATGCCGG GTGGAATGAA TTCGCAGATG
AAGGCAGGAC ATTCTTTTGA GTTTTCGATG GGCCTTATTG TTGAACCATT GAGTATCACT
AAAACATATG AGCAGATAGC AACCTCTGTA TTCGGGTTTA AGGATTACCG GAGCAACGCC
ACTGTTTCTA TGAATACAAC TCTGGATAAC CTGATTGATT ATTCGAAAAC ACGCTACGCC
TGGTTTATTG ATAGCCTGAA AGGCTTTGCT TATGCTACAG ATGTACCGGG GGCAGTGAAA
AATGTTTCGA GCCTGAACCC TTTGGAACTG TCTATTGTGA GGGATGATCA GGAGATGTTT
GATAAAAGGG CATACCCGTT AATGGAGTTT ATGCTGTCAC GCGAGAAATT TCTGTTTGCG
ATTGACAGCA ATCAGAAAAT CCAATCCCCT TCCCGAAAAC TAAGGGGCCC GATTGCTCCC
CTATCCGAAT TACAGGTATT GTCTGATGTT TTTGGTAAGA ACAACTCTTT TTATGCTACC
ATGGCAAAAA AGGAATTTGG AACTGCACGC GTCAGAAATC TTGATGAGGA GCAGAAAGGC
CGGAACTGGG TAAATGCAAT GTTTATGTTT AAGCTGACCT CCGATTCGTC TTATTTGCGT
TTAAGTAAGT TGCTGGCAGA CCAATATCTG AAAGAAAGAG TAAATACCAG GATAAGCCAA
TTTGGTGATC CCTTGTTCAG CTCCAATTTT TTCTGGCCAA CATTTACCAA TAACTGGTCG
GCCCTGCTGG AGTTATATCA ACTTACTGCC GATCAGCGAT ATCTGGAGGC AGCAAGGGAC
GGGGCCAGGC ATTATACCTT GTTTACCTGG ATGGCCCCTG CCATACCAAA TGATGCGATT
ACAGTGAATA AAGGGGGAAA AGCACCCATG TATTGGTACC TGAAATCAAA AGGGCACCAT
CAGATGTATT ACCCTGAAGA AAAAGTCCCT GCATGGAGAC TCTCTGAAAT GGGATTAACA
CCTGAATCAT CAGGTACTTC AACTGGTCAC CGCGCTATTT TTATGTCTAC CTATGCACCC
TGGCTGCTGA GGATAGGCTA TCAAACAAAA GATCCTTTTT TGATGAATGT AGCCAAAGCT
TCTATTGTGG GGCGTTCCGA AAGTTTTCCG GGTTATCATA TCAACACCGA AAGGACTACT
GCCTATGAAA AAGTAGATTT TCCACTTCAT GAACATAAAG ACCAGAGTGT AAACTCCTTT
CATTACAATC ATATTCTGCC AATGGCCTCT ATGTTTGTCG ATTATCTGGT TTCAGATGCT
TATGTAAAAA GCAATGGCAG GATTGACTTT CCAAGTGATT ATATAGAGGG TTATGCTTAT
CTGCAGAATA AGTTTTACGG AGCTAAAAAG GGCAGTTTTT TTCAGTTTGA AAATGTTCAG
CTGTGGATGC CATCCCGTTT GCTGCACATA GATGATATTG CTTTAAACTA TATCAGTGCA
AAAAAAGGAG ATACACTATT TCTGGCTTTT ATGAACCAGT CGCAGAAGGA AGTAAGTACA
CAAGTTTCTA TAGATCCCTC GAGGGTTAAT TTTTCGGACA ATACCGGTTT GCGCATTTTA
TATCCTTCTG AGCAACCTTT GCCTTTAAAA GACGGCTCTT TCCGGATCAA TGTTCCTGCG
GGTGGTATTG TTGCTGTGGC TATTGCCGGT GTAAAAATCA GCAGTGGTTT TCAGGACCAG
ATCCTGAATG TGAAAAAAGA TGAAAGGAGC GATTATACAC ATATCCCGGA GGGAGATACA
AAGGCCTTAT TGTTTAAGCT TGGTGCTTAT GCACAAAAAC TTTTTGTATT TCTTCAGGAA
GACGATACCA GATGGAGGAA GGCCAGGATG ATTTATAAGA TTGATGGGAA AAGGAAACAG
GTGATCGATA AAAATGAATA CCCATTTGAA TTTACCCTGC CCGTTGATAA AGATAAACCA
ATTCGTTTTT ACCTGGAATT AACAGATATC CATGGAAAAC TGATCAGGTC AAAAGAAACG
GAATTAGGCA GATAA
 
Protein sequence
MQANGQKTTD SKGFKMSSKG KTYLFKPDFV VICNEKDPEL ALKPSGLKKV SYNVPTWKTS 
DPNLADYHQQ SVSASVAGDG FDDKILRSAK QDRTANIYHA GKTYFLTATK TVNSGDSICF
IFPEHAMFRL KAWIIKSGTP YPRIEFLFIP KKDGFYSVGY IGAPSFKNGD VDELWQPLIW
TEKRAPLQPY LTASFMATIP TTLVNDGNNS IGVLTASRYL PFQPLPLLSN SQFGIALLND
RSELQPQVFA PMPGGMNSQM KAGHSFEFSM GLIVEPLSIT KTYEQIATSV FGFKDYRSNA
TVSMNTTLDN LIDYSKTRYA WFIDSLKGFA YATDVPGAVK NVSSLNPLEL SIVRDDQEMF
DKRAYPLMEF MLSREKFLFA IDSNQKIQSP SRKLRGPIAP LSELQVLSDV FGKNNSFYAT
MAKKEFGTAR VRNLDEEQKG RNWVNAMFMF KLTSDSSYLR LSKLLADQYL KERVNTRISQ
FGDPLFSSNF FWPTFTNNWS ALLELYQLTA DQRYLEAARD GARHYTLFTW MAPAIPNDAI
TVNKGGKAPM YWYLKSKGHH QMYYPEEKVP AWRLSEMGLT PESSGTSTGH RAIFMSTYAP
WLLRIGYQTK DPFLMNVAKA SIVGRSESFP GYHINTERTT AYEKVDFPLH EHKDQSVNSF
HYNHILPMAS MFVDYLVSDA YVKSNGRIDF PSDYIEGYAY LQNKFYGAKK GSFFQFENVQ
LWMPSRLLHI DDIALNYISA KKGDTLFLAF MNQSQKEVST QVSIDPSRVN FSDNTGLRIL
YPSEQPLPLK DGSFRINVPA GGIVAVAIAG VKISSGFQDQ ILNVKKDERS DYTHIPEGDT
KALLFKLGAY AQKLFVFLQE DDTRWRKARM IYKIDGKRKQ VIDKNEYPFE FTLPVDKDKP
IRFYLELTDI HGKLIRSKET ELGR