Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3589 |
Symbol | |
ID | 8254711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4273906 |
End bp | 4276680 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937241 |
Product | hypothetical protein |
Protein accession | YP_003093842 |
Protein GI | 255533470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.368202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCGA ATGGGCAAAA GACAACTGAC AGTAAGGGGT TTAAAATGAG CTCAAAGGGT AAAACGTACC TGTTTAAACC CGATTTTGTA GTAATCTGCA ACGAAAAAGA TCCAGAGCTG GCATTAAAAC CCTCAGGGTT AAAAAAAGTT TCCTACAATG TCCCAACCTG GAAAACAAGT GATCCTAACC TGGCTGATTA TCATCAGCAG TCAGTTAGCG CCAGTGTTGC CGGCGATGGA TTTGATGATA AAATATTGAG GAGTGCAAAG CAAGATAGAA CAGCCAATAT CTATCATGCA GGAAAAACAT ACTTTCTTAC TGCAACCAAA ACAGTAAATT CCGGTGATTC CATCTGCTTT ATCTTTCCGG AACATGCCAT GTTCAGGCTA AAGGCATGGA TCATCAAAAG TGGTACACCT TATCCCAGGA TAGAATTTTT ATTTATACCT AAAAAAGACG GCTTTTATAG TGTAGGGTAT ATTGGGGCAC CCTCTTTTAA AAATGGTGAT GTTGATGAAC TATGGCAGCC GCTGATCTGG ACAGAAAAAA GGGCTCCATT GCAACCCTAT CTTACCGCGT CTTTTATGGC AACAATACCC ACTACGCTGG TAAATGACGG GAACAATTCA ATAGGCGTAC TGACAGCTTC CAGGTATTTG CCTTTTCAGC CCTTGCCGCT GCTAAGTAAC AGCCAGTTTG GAATTGCATT GCTGAATGAC AGATCTGAAT TACAGCCCCA GGTTTTTGCC CCTATGCCGG GTGGAATGAA TTCGCAGATG AAGGCAGGAC ATTCTTTTGA GTTTTCGATG GGCCTTATTG TTGAACCATT GAGTATCACT AAAACATATG AGCAGATAGC AACCTCTGTA TTCGGGTTTA AGGATTACCG GAGCAACGCC ACTGTTTCTA TGAATACAAC TCTGGATAAC CTGATTGATT ATTCGAAAAC ACGCTACGCC TGGTTTATTG ATAGCCTGAA AGGCTTTGCT TATGCTACAG ATGTACCGGG GGCAGTGAAA AATGTTTCGA GCCTGAACCC TTTGGAACTG TCTATTGTGA GGGATGATCA GGAGATGTTT GATAAAAGGG CATACCCGTT AATGGAGTTT ATGCTGTCAC GCGAGAAATT TCTGTTTGCG ATTGACAGCA ATCAGAAAAT CCAATCCCCT TCCCGAAAAC TAAGGGGCCC GATTGCTCCC CTATCCGAAT TACAGGTATT GTCTGATGTT TTTGGTAAGA ACAACTCTTT TTATGCTACC ATGGCAAAAA AGGAATTTGG AACTGCACGC GTCAGAAATC TTGATGAGGA GCAGAAAGGC CGGAACTGGG TAAATGCAAT GTTTATGTTT AAGCTGACCT CCGATTCGTC TTATTTGCGT TTAAGTAAGT TGCTGGCAGA CCAATATCTG AAAGAAAGAG TAAATACCAG GATAAGCCAA TTTGGTGATC CCTTGTTCAG CTCCAATTTT TTCTGGCCAA CATTTACCAA TAACTGGTCG GCCCTGCTGG AGTTATATCA ACTTACTGCC GATCAGCGAT ATCTGGAGGC AGCAAGGGAC GGGGCCAGGC ATTATACCTT GTTTACCTGG ATGGCCCCTG CCATACCAAA TGATGCGATT ACAGTGAATA AAGGGGGAAA AGCACCCATG TATTGGTACC TGAAATCAAA AGGGCACCAT CAGATGTATT ACCCTGAAGA AAAAGTCCCT GCATGGAGAC TCTCTGAAAT GGGATTAACA CCTGAATCAT CAGGTACTTC AACTGGTCAC CGCGCTATTT TTATGTCTAC CTATGCACCC TGGCTGCTGA GGATAGGCTA TCAAACAAAA GATCCTTTTT TGATGAATGT AGCCAAAGCT TCTATTGTGG GGCGTTCCGA AAGTTTTCCG GGTTATCATA TCAACACCGA AAGGACTACT GCCTATGAAA AAGTAGATTT TCCACTTCAT GAACATAAAG ACCAGAGTGT AAACTCCTTT CATTACAATC ATATTCTGCC AATGGCCTCT ATGTTTGTCG ATTATCTGGT TTCAGATGCT TATGTAAAAA GCAATGGCAG GATTGACTTT CCAAGTGATT ATATAGAGGG TTATGCTTAT CTGCAGAATA AGTTTTACGG AGCTAAAAAG GGCAGTTTTT TTCAGTTTGA AAATGTTCAG CTGTGGATGC CATCCCGTTT GCTGCACATA GATGATATTG CTTTAAACTA TATCAGTGCA AAAAAAGGAG ATACACTATT TCTGGCTTTT ATGAACCAGT CGCAGAAGGA AGTAAGTACA CAAGTTTCTA TAGATCCCTC GAGGGTTAAT TTTTCGGACA ATACCGGTTT GCGCATTTTA TATCCTTCTG AGCAACCTTT GCCTTTAAAA GACGGCTCTT TCCGGATCAA TGTTCCTGCG GGTGGTATTG TTGCTGTGGC TATTGCCGGT GTAAAAATCA GCAGTGGTTT TCAGGACCAG ATCCTGAATG TGAAAAAAGA TGAAAGGAGC GATTATACAC ATATCCCGGA GGGAGATACA AAGGCCTTAT TGTTTAAGCT TGGTGCTTAT GCACAAAAAC TTTTTGTATT TCTTCAGGAA GACGATACCA GATGGAGGAA GGCCAGGATG ATTTATAAGA TTGATGGGAA AAGGAAACAG GTGATCGATA AAAATGAATA CCCATTTGAA TTTACCCTGC CCGTTGATAA AGATAAACCA ATTCGTTTTT ACCTGGAATT AACAGATATC CATGGAAAAC TGATCAGGTC AAAAGAAACG GAATTAGGCA GATAA
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Protein sequence | MQANGQKTTD SKGFKMSSKG KTYLFKPDFV VICNEKDPEL ALKPSGLKKV SYNVPTWKTS DPNLADYHQQ SVSASVAGDG FDDKILRSAK QDRTANIYHA GKTYFLTATK TVNSGDSICF IFPEHAMFRL KAWIIKSGTP YPRIEFLFIP KKDGFYSVGY IGAPSFKNGD VDELWQPLIW TEKRAPLQPY LTASFMATIP TTLVNDGNNS IGVLTASRYL PFQPLPLLSN SQFGIALLND RSELQPQVFA PMPGGMNSQM KAGHSFEFSM GLIVEPLSIT KTYEQIATSV FGFKDYRSNA TVSMNTTLDN LIDYSKTRYA WFIDSLKGFA YATDVPGAVK NVSSLNPLEL SIVRDDQEMF DKRAYPLMEF MLSREKFLFA IDSNQKIQSP SRKLRGPIAP LSELQVLSDV FGKNNSFYAT MAKKEFGTAR VRNLDEEQKG RNWVNAMFMF KLTSDSSYLR LSKLLADQYL KERVNTRISQ FGDPLFSSNF FWPTFTNNWS ALLELYQLTA DQRYLEAARD GARHYTLFTW MAPAIPNDAI TVNKGGKAPM YWYLKSKGHH QMYYPEEKVP AWRLSEMGLT PESSGTSTGH RAIFMSTYAP WLLRIGYQTK DPFLMNVAKA SIVGRSESFP GYHINTERTT AYEKVDFPLH EHKDQSVNSF HYNHILPMAS MFVDYLVSDA YVKSNGRIDF PSDYIEGYAY LQNKFYGAKK GSFFQFENVQ LWMPSRLLHI DDIALNYISA KKGDTLFLAF MNQSQKEVST QVSIDPSRVN FSDNTGLRIL YPSEQPLPLK DGSFRINVPA GGIVAVAIAG VKISSGFQDQ ILNVKKDERS DYTHIPEGDT KALLFKLGAY AQKLFVFLQE DDTRWRKARM IYKIDGKRKQ VIDKNEYPFE FTLPVDKDKP IRFYLELTDI HGKLIRSKET ELGR
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