Gene Phep_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3584 
Symbol 
ID8254706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4264676 
End bp4266427 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content40% 
IMG OID644937236 
Producthypothetical protein 
Protein accessionYP_003093837 
Protein GI255533465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.632937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGA TTTCATCAAC AAAAATTAGA CTTTCTTTCA TTCTGTTATC CATTGGATTG 
ATATCATTCT CTATCGACAG AAATTATGAT AGTGGAATAG CTTCATTAAA AGATTCATTC
CCGGAAGAAA ACTCATTTGG AATGCGGGTA AGAAAAGTAC CTAAAAAAGC CGGTAGTATT
CATCAGCCAG TTATTGTTGC TAAGGGACCT GGCAATGAAG CGACCATATT ACGTACTTCG
CAAAACGAGA TTAAAGTTTT TTTTGTAAAC AGACCAGGAG ATGCTAACAA ACTCATGTCG
GTTTCTTCTG CAGACAATGG ATTATCCTGG ACTGCAGCAC GAAAAGAATT TGACCTGCCA
GGACAGGCTT ATTATGCCAA CGCCCTACTT AAAGATGCCG AAGGCAACTT GCATTGTATC
TTCCACATCT TCGGCGAAGG CAAAAACGGT TATCGAGGCA GGCATCTCAA TTTGTGGTAC
TGCCATACGC TTAACAATGG CAAAGATTGG TCGGAACCAA CAGAAATTTA CCATGGTTAT
GTTGGTTCTA TCAGGGGTTT CATTCAGTTA AAGAATAAAA GATTTTTATT GGTCTTTGCG
AAGGCAATAC CGGCAAGAAG CCAGAAACCA AGCAACAATA GTACTGATTA TGGTTTACAT
GACATTGGTG CCCTTTATTC TGACAACATG GGAAAAAGCT GGCAATCTTC TGAAAATGAT
TTAAAAATAC CCATAGAATC AACACAAACC ACCCGATATG GCGGTGTTGA ACCAAATATT
ATAGAACTAT CTGACGGAAA AATATGGATG CTGATCCGTA CCAATAAAGG TGTTACCTAC
CAGTCTTTTT CCACTGATTC AGGTACAAGC TGGCACCAAC CAGAGCCTAC AAAGTTTATT
TCTTCAGACT CACCGGCCGC CACCTTGCGA CTTGCAGACA ACCGGATTGT TATGTTTTGG
AACAGCAACC AGCGATGGGA TAACAAAAGA ACCTATGCAC TTGGTGGCCG GGAAACACTA
CATGCTGCCA TATCATCTGA TGAAGGAAAA ACATGGAAAG GGTTTAGAGA AGTACTCACA
AGCCCATCGA CAAAACAGAT GGAAAAAGGT GACAGGGGCA CTGCATATCC ATCTGCCATA
CAATCTGCCG ATGGGAAAAT CGTATTGGTT TCGGGCCAGG CAGAAGAACG AGCTATTGTT
AAGTTTGATC CAAACTGGCT TGAGCAAACT ACGCAAACTG ATGATTTTTC TGAGAACTTA
GCCAAATGGA CATTTTTTAA TAACGATGGT TTGACAAGCA TGGGATCCGC TTTTTCTTTA
AGCCAAAAGG GATTGCTGAT CCGTAAAACT GATGGAACTC AAGATGCCGT TTGGAATTTC
CCAATAGCCA CAAAAGGTAA ACTGCTTATC AATGTCATCA GTAACCCTGG TAATAAGGGG
ATCATACTGG CAATAACCGA CAATTTTTCG GTTTCTTACG ATTCATTGGC ATCCAAAAGT
GCAGTAATTT ATCACACCAT AAAACCGCAA GATATGCCGT TTATGGATAA ACCATTTAAA
ATCAGGCTGA CATGGGATAT GCAAAAAGGA AAGTCCTGGT TATACTTAAA CGATCACCTC
ATTACTGAAA AACCGTTTGA ACGCAATACC TATTTTGGCC TTAATTATCT ACGTTTAGGG
ATACCAGGAG GAAACATACA AGATCATAAT GGTTTTCTTG TTAGATCTGT AAAAATGTCC
CCCTCCTGGT AA
 
Protein sequence
MKRISSTKIR LSFILLSIGL ISFSIDRNYD SGIASLKDSF PEENSFGMRV RKVPKKAGSI 
HQPVIVAKGP GNEATILRTS QNEIKVFFVN RPGDANKLMS VSSADNGLSW TAARKEFDLP
GQAYYANALL KDAEGNLHCI FHIFGEGKNG YRGRHLNLWY CHTLNNGKDW SEPTEIYHGY
VGSIRGFIQL KNKRFLLVFA KAIPARSQKP SNNSTDYGLH DIGALYSDNM GKSWQSSEND
LKIPIESTQT TRYGGVEPNI IELSDGKIWM LIRTNKGVTY QSFSTDSGTS WHQPEPTKFI
SSDSPAATLR LADNRIVMFW NSNQRWDNKR TYALGGRETL HAAISSDEGK TWKGFREVLT
SPSTKQMEKG DRGTAYPSAI QSADGKIVLV SGQAEERAIV KFDPNWLEQT TQTDDFSENL
AKWTFFNNDG LTSMGSAFSL SQKGLLIRKT DGTQDAVWNF PIATKGKLLI NVISNPGNKG
IILAITDNFS VSYDSLASKS AVIYHTIKPQ DMPFMDKPFK IRLTWDMQKG KSWLYLNDHL
ITEKPFERNT YFGLNYLRLG IPGGNIQDHN GFLVRSVKMS PSW