| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3583 |
|---|
| Symbol | |
|---|
| ID | 8254705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4263535 |
|---|
| End bp | 4264704 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644937235 |
|---|
| Product | BNR repeat-containing glycosyl hydrolase |
|---|
| Protein accession | YP_003093836 |
|---|
| Protein GI | 255533464 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.436734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA AACTTATCCT GGCATCCGTT CTGATCATTG TGTCTTTCGG TTTAAGGCCT
CTAAAAAGTA ATGCTGCCCT CAACTTTGTA TTTGCTGATA CCGTCAATAC AAAGGGCGGA
AAGTTAACCA CAAATGGAGT ATGGATTGCT AAAAATGTGA AAGAAATAAA TGGCTTAAAG
ATGGGCCCTT TTATAAATTT ACCCGATGGG AGCCTGCTTA CCGTAGACAG CATATACAGT
TTTATAAGTA AAGACAATGG GAAAACATGG AAATCGTACC CTATTTTTAA TGAACCGGAT
AAATTTGCCA TCCGGATTGA AAGAGCACTG GTATATACCA AAAGTGGTAC CATAATACTC
GCTTTCGCAA ATGACAAAGA AAAGGCAAAC TGGAACTGGC AGAAAGATAT CAGAGACTCT
CCAGGGGCAA TCTTACCAAC TTATGCAGTA AGAAGTCTGG ATGGAGGTAA AACCTGGACT
AACCTTCAGA AACTGCATGA CGATTGGACT GGAGCCATAA GGGATATGAT CGAAACAAAA
GATGGCAAAG TTGTTTTTAC CTCGATGATG ATGCGCCACA ATCCCGGCAG ACACGCTGTG
GTAACTTATA CCAGCAGTGA TGATGGTAAA AACTGGAAAA GAAGCAACAT TATAGACCTT
GGCGGCGTAG GAAACCATGG AGGAGTAACA GAGTCCACAT TAGAACAACT TCGTGACGGA
CGTCTTTGGA TGTTATTGCG TACCAATTGG GGTAAATTCT GGGAAACCTA TTCCAGTGAC
AACGGTATAA ATTGGGGAGC TTACAAAGCA ACAGATTTTG ATGCCAGCTC TGCTCCCGGT
ATGCTAAAGC GATTAAAGAG CGGTCGTCTG GTACTCATAT GGAACAGATA CTACCCCCAG
GGTAAAACGG ACTACCCTTT AAGAGGCGGT GACAACCAGT GGTCTGAAGT GCCGGTAAGT
AACCATCGGG AGGAATTAAC CATCAAGTTT TCTGAGGATG ACGGAAAAAC ATGGACGAAA
CCCACTGTCT TTGCAAAAAC AACAAAAAAG GGCACCCAAA TATCTTACCC CTATCTTTTA
GAACGAAATC CGGGCGAATT ATGGGTTACA ACAATGTTTG GTGATCTTAG AGTTAAATTA
TATGAAAAGG ATTTCATCAA CAAAAATTAG
|
|---|
| Protein sequence | MKTKLILASV LIIVSFGLRP LKSNAALNFV FADTVNTKGG KLTTNGVWIA KNVKEINGLK
MGPFINLPDG SLLTVDSIYS FISKDNGKTW KSYPIFNEPD KFAIRIERAL VYTKSGTIIL
AFANDKEKAN WNWQKDIRDS PGAILPTYAV RSLDGGKTWT NLQKLHDDWT GAIRDMIETK
DGKVVFTSMM MRHNPGRHAV VTYTSSDDGK NWKRSNIIDL GGVGNHGGVT ESTLEQLRDG
RLWMLLRTNW GKFWETYSSD NGINWGAYKA TDFDASSAPG MLKRLKSGRL VLIWNRYYPQ
GKTDYPLRGG DNQWSEVPVS NHREELTIKF SEDDGKTWTK PTVFAKTTKK GTQISYPYLL
ERNPGELWVT TMFGDLRVKL YEKDFINKN
|
|---|
| |