| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3582 |
|---|
| Symbol | |
|---|
| ID | 8254704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4262803 |
|---|
| End bp | 4263528 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644937234 |
|---|
| Product | lipolytic protein G-D-S-L family |
|---|
| Protein accession | YP_003093835 |
|---|
| Protein GI | 255533463 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.377533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGAA CTGAATCCCA TTGTGTAAAA AAGATCCGTT TCAGTATCTC ATTATTACTG
ATAGCCACTA TTTGGACCAA TTCACAGGCA CAAGACACCT TAAAAATTGT GGCTTTTGGT
AATTCGACCA CTGCCCCCAG AAAAACTGTC AGCAAAGTGT ATGCTGTCAG GCTTCAGGAT
ACCTTATCAC AGCTGGGCAT AGCTTCTTGT GTAATCAATG CCGGTGTACC TGGTAGCCAT
TCCGGCTACA TAAAAGACAA TAACCTCCAC AGGGTAGCTC ATGGAATGGA TAGATTTGAA
AAAGATGTAT TGACCAACGC ACCCAGCTGG TTAGTCATCA GTTTCGGGAT CAACGATGCC
TGGCAGGATA ATGGTAAGGA AAGCCCTTCC CGGCTATCTA TAGAACAATA CTGCAACAAC
CTCTCCTATT TTATTGACCA GGCAAAGAAA AGTAAGATCA AGCCCATCCT GATGACGCCG
AACCCAATTG GAAAAAAATA TGAAAGCTGG CGCCATAAAA GGTTAAAAAA ATACATGAAG
GCAACCAAAC GCCTGGCTAA GCAACAAGAA ATACCCCTGG TGGATGTATG GGCCTTGTTT
TATAAAAATG CTTTTCATCA AACTGATGGC GTAGACGTCT TGTTGCTTGA TGGCATGCAC
CCCAATGATG CAGGGCAGAA AATAATGTCT GATGCATTGA TAAAAATCAT TAATCAACAA
AAATAA
|
|---|
| Protein sequence | MVRTESHCVK KIRFSISLLL IATIWTNSQA QDTLKIVAFG NSTTAPRKTV SKVYAVRLQD
TLSQLGIASC VINAGVPGSH SGYIKDNNLH RVAHGMDRFE KDVLTNAPSW LVISFGINDA
WQDNGKESPS RLSIEQYCNN LSYFIDQAKK SKIKPILMTP NPIGKKYESW RHKRLKKYMK
ATKRLAKQQE IPLVDVWALF YKNAFHQTDG VDVLLLDGMH PNDAGQKIMS DALIKIINQQ
K
|
|---|
| |