Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3577 |
Symbol | |
ID | 8254699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4254982 |
End bp | 4256133 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937229 |
Product | glycosyl hydrolase BNR repeat-containing protein |
Protein accession | YP_003093830 |
Protein GI | 255533458 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.169929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.71691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG AAAAAAAACA CCCGTTTACC GGCTTCAGTT TAGGTGCTGC ATGTCTGTTA TGTATGTTAT TTTTTGGACT GGCCGGTAAC CTGCTGGCAC AAACAGGCCC GGGAAAGGAA ACGGTTCTTA CTTTAAATCC CGGGCAGGAT AACCCCCGAA ACAGTGAAGG GGATTTTTTG ACTTTAAAGG ATGGGCGGGT CATGTTTGTA TATAGTCATT ATACGGGAAC ATCTTCCAGT GATCATGCTT CGGCTTTCCT GGCGGCCCGC TATTCTGCTG ATGGTGGAAA AACCTGGACC AATAGCGATA GGGTAATCGT AGAAAAGGAA GGTACGATGA ACGTAATGTC TGTTTCTCTA TTGAGGTTAA AAAATGGGAA AATCGCTTTG TTCTACCTGA AAAAGAATTC TACTTCCGAC TGTATACCTA TGGTTCGTTT TTCAAGTGAT GAAGCTAAAA CCTGGACTGA TCCAATAGCC TGCATTACAG ATAAAAAGGG CTATTTTGTG CTGAACAACA GTCGGGTAAT TCAATTAAAA AGTGGGAGGA TACTTTTGGC GGTAGCATTG CACCAGACTC CAGAACAAGC CAAATGGTCT AACAGCGGTA CTTTATGGAG TTATTACTCG GACGATAATG GAAAAACCTG GAAGCCGGGG CAGCAGGTGG CCAATCCAGA TGGGGTGGTG ACACAGGAGC CTGGTGTGGT GGAACTGAAA AACGGAAATG TTTTAATGTT CATCAGGACA GATGCGGGAG TCCAGTATTT GTCCTATTCA AAAAACAAGG GACAAAGTTG GAGCCCTGCG CAGCCTTCTA CGATTAAATC ACCTGTTTCT CCGGCTTCTA TTAAAAGGAT TCCGTTGACA GGCGACCTGA TATTGGTTTG GAACAATAAC GGGGGCGACA ACCCGCTGAT TAAGGGAAAA AGGACACCCC TTAATGTGGC CATTTCAAAA GATGAGGGGA AAACCTGGCA AAATATTAAA ACGGTAGAGG ATGATCCGAA TGGATGGTAC TGCTATATCG CGATCTGTTT TTCAGGTAAG CATGTGCTTT TAAGCTATTG TAGCGGGGTG CAGCCCAGAT TTTCGCACTT AACCGTGACA GATATTAAAC GTTTAAGCCT GGATTGGGTA TATGGAAAAT AA
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Protein sequence | MKKEKKHPFT GFSLGAACLL CMLFFGLAGN LLAQTGPGKE TVLTLNPGQD NPRNSEGDFL TLKDGRVMFV YSHYTGTSSS DHASAFLAAR YSADGGKTWT NSDRVIVEKE GTMNVMSVSL LRLKNGKIAL FYLKKNSTSD CIPMVRFSSD EAKTWTDPIA CITDKKGYFV LNNSRVIQLK SGRILLAVAL HQTPEQAKWS NSGTLWSYYS DDNGKTWKPG QQVANPDGVV TQEPGVVELK NGNVLMFIRT DAGVQYLSYS KNKGQSWSPA QPSTIKSPVS PASIKRIPLT GDLILVWNNN GGDNPLIKGK RTPLNVAISK DEGKTWQNIK TVEDDPNGWY CYIAICFSGK HVLLSYCSGV QPRFSHLTVT DIKRLSLDWV YGK
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