| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3567 |
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| Symbol | |
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| ID | 8254689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4245690 |
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| End bp | 4246478 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937219 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003093820 |
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| Protein GI | 255533448 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.694333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.208975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT TTAAGCTGGA TGGCAAAGTG GCCATCGTAA CAGGTGGTGC GGGATTGTAT
GGGAAGCCTA TTTCATTAGC ACTGGCTGAA GCTGGCGCGT TGGTCCTTGT GGCTTCTCGC
GATCTGGAAA AATGCGATGC CTATGCAATG ACGCTTAGGC TACAAGGCTT AAAAGCGGAG
GGAATGTTCC TGGATATGGC GGACGAACAA AGCATTCGGG ATTTTACAAA AAAGATCATC
GAAAGGCATG GACAAATAGA TATACTGGTA AACAATGCGG TATCCAGGGA GGGGTTTAAA
GATTTAGAGG AGGTGAGCAA AACAGAATGG GAATGTTCGC AGCAAATCAA CTCCACGGGA
CTAATGCTAA TAACCCAAGC GGTGGTTTTG GAAATGAAAG CGCGGGGCTC TGGTAACATT
ATCAACATTG GCTCTATACA GGGAGTTGTG GGGCCAAACT TTGGAGTTTA TGGCGATACA
GGGATGACAA GTCCTTTAAA CTACACCTAT GATAAATGGG GAATGGTTGG TTTTACTAAA
TGGCTTGCAA ATTTTTATGG CAAGTTTAAT ATCAGAGCCA ATTGCATCAG TCCGGGGGGG
TATGGCCCTG GGGTGGCGGA ACTTATTGGA CAAAACGAAT TTGTAGAGAA CTATAAGAAG
CTGACCCCAC TGGGGAGGTT TGCGGAAGAT GATGACATCA AAGGCCCTGT CATTTTTCTG
GCTTCAGAAG CCTCGGCGTA TATAACAGGG CATAATTTGC TGGTAGACGG TGGTTGGACA
AGTTGGTAG
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| Protein sequence | MKIFKLDGKV AIVTGGAGLY GKPISLALAE AGALVLVASR DLEKCDAYAM TLRLQGLKAE
GMFLDMADEQ SIRDFTKKII ERHGQIDILV NNAVSREGFK DLEEVSKTEW ECSQQINSTG
LMLITQAVVL EMKARGSGNI INIGSIQGVV GPNFGVYGDT GMTSPLNYTY DKWGMVGFTK
WLANFYGKFN IRANCISPGG YGPGVAELIG QNEFVENYKK LTPLGRFAED DDIKGPVIFL
ASEASAYITG HNLLVDGGWT SW
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