| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3565 |
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| Symbol | |
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| ID | 8254687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4243053 |
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| End bp | 4244360 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937217 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_003093818 |
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| Protein GI | 255533446 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.223934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA AGAAATATAT CGAATCTGGC GCTTTATTAG CGAGGGCAAA AAAGGTATTG
GCCGGAGGTG TTTCCTCAGA GTTCAGAAAG TATAATCATC CACATGCACT GTTCTATACC
CATGGAAGGG GAGCTAAGGT TTATGATGCG GATGGGAACG AGTATCTTGA TTTTACTTTA
AGCCAGGGGC CACTCATTCT GGGACATTCC CATCCGGAAG TACTGCACGC GATAAATGAT
TATTCGGAGC TAGGGCAGCT TTTTGCAGGG CAACACATTC GCGAGCTGGA ATTGGCTGAA
AAAATCCAGG AGCTCATTCC TTCCGCTGAG CTGATGAGGT TTTGTTTAGA TGGTTCTGAA
GCTGTTCAAA CGGCATTTCG CGTGGCCAGA GCTAAAACAG GTAAACAAAA GTTTCTGCGT
TTTGAGGGAC ATTATCATGG TTGGCTGGAC AATGTAAGTT GGGGCATATC TGCCGGTCCT
GATGGATTTT TAGGCAGCAG GGAAAATCCA GAGGTATATC CCTGGTCTGA AGGCCTGCCA
GCCCGTGCCC GGGAAGAATT TTTGATCATC CCCTGGAACG ATCCTGAGTT ATTGATCGCA
ACTGTTGAGC AACATCACCA TGAACTGGCT GCAATTATTA CCGAGCCGGT GATGTGTAAT
AATGGCTGTA TCGTTGCAGA TAATGGGTTT TTACAGTGTA TGCGGGATCT TTGCGACAGA
TTTGGGATAG CGCTTATTTT TGATGAGGTG ATCACTGGCT TTCGACTATC GCTAGGTGGT
GCACAGCGTT ATTTTAATAT CAGTCCGGAC CTGTCTATTT TTGCGAAAGC AATGGGGAGC
GGTTATCCAA TTAGTGTGGT GGCTGGAAAA AATGAATGGA TGCGTTTAAT TGCCGATTCA
CGCGTAATTC ATGCTGGTAC CATGAATTCG GGAAATGCCT CTATAGCAGC GGCATTGGCT
ACAATTCAGG TGCTGGAACG CGAAGATCCA TATGAAAATA TGTTTTTGCT GGGTGAGAGG
TTAATGGAAG GCTTGTGTAA AGCGGCGAAA GATACAGGTA AGCAATTACT TGTCCAGGGA
CCTGGGCCTA TGTTTAGCAT TGCTTTTACG CAGTTGGATC AGATAAAGGA TTATCGGGAT
ACACTTCAAT CTGATCGCTT AAAATTAGGA AAATTCATTT CTGGTATGCA CAATGAGGGG
GTAAGGATTA TTGGTCGTGG GTTATGGTAT ATCAGTGCAG CACATCGGGA GGAGGATATA
GAATTTGCAT TGCATAAAGC TCAAAAAGTA CTTAAGGAAA TGCATTAA
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| Protein sequence | MENKKYIESG ALLARAKKVL AGGVSSEFRK YNHPHALFYT HGRGAKVYDA DGNEYLDFTL
SQGPLILGHS HPEVLHAIND YSELGQLFAG QHIRELELAE KIQELIPSAE LMRFCLDGSE
AVQTAFRVAR AKTGKQKFLR FEGHYHGWLD NVSWGISAGP DGFLGSRENP EVYPWSEGLP
ARAREEFLII PWNDPELLIA TVEQHHHELA AIITEPVMCN NGCIVADNGF LQCMRDLCDR
FGIALIFDEV ITGFRLSLGG AQRYFNISPD LSIFAKAMGS GYPISVVAGK NEWMRLIADS
RVIHAGTMNS GNASIAAALA TIQVLEREDP YENMFLLGER LMEGLCKAAK DTGKQLLVQG
PGPMFSIAFT QLDQIKDYRD TLQSDRLKLG KFISGMHNEG VRIIGRGLWY ISAAHREEDI
EFALHKAQKV LKEMH
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