Gene Phep_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3551 
Symbol 
ID8254672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4223921 
End bp4226146 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content44% 
IMG OID644937202 
Productsodium/hydrogen exchanger 
Protein accessionYP_003093804 
Protein GI255533432 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.994377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACACT TACCAGTATT GATTACTGAT TTAGGTTTGA TACTTGCAGC CGCAGGAATA 
ACTACCCTGC TTTTTAAAAG AATTAAGCAG CCACTGGTTT TGGGCTACAT CCTGGCTGGT
TTACTTGTTG GTCCGCATAT AAAATTTATT CCAACTGTTA CTGACAATGA AAGCATCCAC
ATCTGGGCAG AGATTGGTGT AATCTTTTTG CTTTTTAGCC TGGGGCTTGA GTTCAGTTTC
AAAAAGCTGG TTAAAGTGGG TGGTTCGGCC TCTATTACCG CAATTGTTGA GGTGGTATTT
ATGCTGCTAA TTGGTTTTGT AGCCGGTAAA GCGATGGGCT GGGCTACTAT GGACAGTATA
TTTTTAGGGG GTATCCTCTC TGTTTCTTCC ACTACCATTA TCATCAGGGC CTTTGAAGAA
CTGGGTGTAA AACACAAAAA GTTTGCCGGC CTGGTATTCG GAGTACTCAT TGTAGAAGAC
CTGGTGGCCA TTTTGTTATT GGTATTGTTG TCTACCCTGG CAGTAAGCCA GCAGTTTGCC
GGTGCAGAAA TGCTGGTATC TATTTTAAAA CTATGCTTTT TTCTTGTCTT ATGGTTCATT
GGGGGCATAT TCCTGGTACC TACCTTTTTA AAGGCCACCA AAAAGCTGAT GAATGATGAG
ACCATGCTGG TGGTATCGAT AGCGTTATGC CTGATCATGG TATTACTGGC CGTTAAGGTT
GGATTTTCTC CTGCCCTGGG GGCTTTTATT ATGGGTTCCA TTTTAGCCGA GACCACTCAG
GCAGAACGCA TAGAGCACCT GACCAAATCT GTTAAGGATC TATTTGCAGC TATATTTTTT
GTTTCGGTAG GGATGCTGAT AGATCCAGGG ATCCTGGTGG ATTATGCGGT GCCAATCCTC
ATCATTACAC TTGCAACCAT CCTTGGCAAA TTTTTAAGCT CGGGTATGGG CGCACTGCTT
TCCGGTCAGC CGCTTAAAAC TTCGGTACAA ACGGGCCTGA GCCTGGCTCA GATCGGTGAA
TTCTCTTTCA TCATTGCCAC CCTGGGGGTA ACCTTAAAGG TAACCAGCGA TTTTCTTTAT
CCAATTGCTG TGGCAGTATC GGCCATTACA ACCTTCACCA CCCCCTACCT GATCAAAGCC
TCGGAACCAT TCTATTTCTT TTTAGAGCGT AACCTGCCTA AAAAATGGGT AGAGGGCCTA
AACAGATACA GTTCCAGTAC AGCCGGAATT ACTACTTTGA GCGATTGGAA AATACTTTTA
AAATCCTATA CCTTTAATAC CATTATCCAT TCTGTTATCC TGATTGCACT GGTTTTTCTG
GGAGCTAAGT ATCTTCAGCC ATTTATTACG GGGAACATCA TCAATGGAAA TAAGGGTATC
ATCATTAGCC TGGTGGTGAC CTTAATTTTT ATGACACCTT TTTTATGGGC CCTGGCCATA
CGAAGGATTG AAAGAAAAGC CTATTCGCAT TTGTGGCTGA ATAAAAAATA TACCCGTGGG
CCGCTGATTG CACTGGAGAT TTTGCGCATT GCCCTGGCCA TTTTCTTTGT AGGCTTCCTC
ATTTTCCAGT TTTATAGTAC ATGGCTGGCC ATTACCATTG CTGTTGTGCT GATTGTTTCG
GGTATGGTGA TCTTTTCAAG AAAGCTACAA GGTTTTTACA ACAGACTGGA AAGCCGCTTT
TTACTGAACT TAAATGCCCG GGAAGCCCAA AATGCACAAC CCGAGATTTT GCCCTGGGAT
ACCCACCTTG CTGAGCTGGT GGTAGCGCCA GAGTCTAAAC TGGTAGGCCA GACGCTCATA
GAACTTTCCA TCAGGGAAAA ATACGGGGTG AATATCGCCC TGATAGAGCG TGGCAAGATT
ATGATTCCTA CACCAGGGCG CGATGAAAGA TTATATCCCA ATGATAAGGT ATTGGTGATT
GGTACTGATG CACAGCTGGC CATGATCAAG GAACTTTTTG AAGGAAGTGT GGATGAGCAT
GAAGAAGCGG CCAATTTCCC GAAGAAGGAC ATGACCTTAC AAAAGATTGT GATCAATGCA
AATTCGCCGG TATACGGACA AAGCATCCGC AGCTCGGGTA TCAGGGAAAC TACGCAGGGC
CTGGTGGTAG GAATAGAACG CAATGGTGAG CGCATATTAA ATCCAGATTC GAATATGGTT
TTTGAAAATG AAGATATTGT CTGGATAGTT GGGAACAATA AAAAGGTTCC TGAACTGCTG
AAATAA
 
Protein sequence
MIHLPVLITD LGLILAAAGI TTLLFKRIKQ PLVLGYILAG LLVGPHIKFI PTVTDNESIH 
IWAEIGVIFL LFSLGLEFSF KKLVKVGGSA SITAIVEVVF MLLIGFVAGK AMGWATMDSI
FLGGILSVSS TTIIIRAFEE LGVKHKKFAG LVFGVLIVED LVAILLLVLL STLAVSQQFA
GAEMLVSILK LCFFLVLWFI GGIFLVPTFL KATKKLMNDE TMLVVSIALC LIMVLLAVKV
GFSPALGAFI MGSILAETTQ AERIEHLTKS VKDLFAAIFF VSVGMLIDPG ILVDYAVPIL
IITLATILGK FLSSGMGALL SGQPLKTSVQ TGLSLAQIGE FSFIIATLGV TLKVTSDFLY
PIAVAVSAIT TFTTPYLIKA SEPFYFFLER NLPKKWVEGL NRYSSSTAGI TTLSDWKILL
KSYTFNTIIH SVILIALVFL GAKYLQPFIT GNIINGNKGI IISLVVTLIF MTPFLWALAI
RRIERKAYSH LWLNKKYTRG PLIALEILRI ALAIFFVGFL IFQFYSTWLA ITIAVVLIVS
GMVIFSRKLQ GFYNRLESRF LLNLNAREAQ NAQPEILPWD THLAELVVAP ESKLVGQTLI
ELSIREKYGV NIALIERGKI MIPTPGRDER LYPNDKVLVI GTDAQLAMIK ELFEGSVDEH
EEAANFPKKD MTLQKIVINA NSPVYGQSIR SSGIRETTQG LVVGIERNGE RILNPDSNMV
FENEDIVWIV GNNKKVPELL K