Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3551 |
Symbol | |
ID | 8254672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4223921 |
End bp | 4226146 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937202 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003093804 |
Protein GI | 255533432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.994377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACACT TACCAGTATT GATTACTGAT TTAGGTTTGA TACTTGCAGC CGCAGGAATA ACTACCCTGC TTTTTAAAAG AATTAAGCAG CCACTGGTTT TGGGCTACAT CCTGGCTGGT TTACTTGTTG GTCCGCATAT AAAATTTATT CCAACTGTTA CTGACAATGA AAGCATCCAC ATCTGGGCAG AGATTGGTGT AATCTTTTTG CTTTTTAGCC TGGGGCTTGA GTTCAGTTTC AAAAAGCTGG TTAAAGTGGG TGGTTCGGCC TCTATTACCG CAATTGTTGA GGTGGTATTT ATGCTGCTAA TTGGTTTTGT AGCCGGTAAA GCGATGGGCT GGGCTACTAT GGACAGTATA TTTTTAGGGG GTATCCTCTC TGTTTCTTCC ACTACCATTA TCATCAGGGC CTTTGAAGAA CTGGGTGTAA AACACAAAAA GTTTGCCGGC CTGGTATTCG GAGTACTCAT TGTAGAAGAC CTGGTGGCCA TTTTGTTATT GGTATTGTTG TCTACCCTGG CAGTAAGCCA GCAGTTTGCC GGTGCAGAAA TGCTGGTATC TATTTTAAAA CTATGCTTTT TTCTTGTCTT ATGGTTCATT GGGGGCATAT TCCTGGTACC TACCTTTTTA AAGGCCACCA AAAAGCTGAT GAATGATGAG ACCATGCTGG TGGTATCGAT AGCGTTATGC CTGATCATGG TATTACTGGC CGTTAAGGTT GGATTTTCTC CTGCCCTGGG GGCTTTTATT ATGGGTTCCA TTTTAGCCGA GACCACTCAG GCAGAACGCA TAGAGCACCT GACCAAATCT GTTAAGGATC TATTTGCAGC TATATTTTTT GTTTCGGTAG GGATGCTGAT AGATCCAGGG ATCCTGGTGG ATTATGCGGT GCCAATCCTC ATCATTACAC TTGCAACCAT CCTTGGCAAA TTTTTAAGCT CGGGTATGGG CGCACTGCTT TCCGGTCAGC CGCTTAAAAC TTCGGTACAA ACGGGCCTGA GCCTGGCTCA GATCGGTGAA TTCTCTTTCA TCATTGCCAC CCTGGGGGTA ACCTTAAAGG TAACCAGCGA TTTTCTTTAT CCAATTGCTG TGGCAGTATC GGCCATTACA ACCTTCACCA CCCCCTACCT GATCAAAGCC TCGGAACCAT TCTATTTCTT TTTAGAGCGT AACCTGCCTA AAAAATGGGT AGAGGGCCTA AACAGATACA GTTCCAGTAC AGCCGGAATT ACTACTTTGA GCGATTGGAA AATACTTTTA AAATCCTATA CCTTTAATAC CATTATCCAT TCTGTTATCC TGATTGCACT GGTTTTTCTG GGAGCTAAGT ATCTTCAGCC ATTTATTACG GGGAACATCA TCAATGGAAA TAAGGGTATC ATCATTAGCC TGGTGGTGAC CTTAATTTTT ATGACACCTT TTTTATGGGC CCTGGCCATA CGAAGGATTG AAAGAAAAGC CTATTCGCAT TTGTGGCTGA ATAAAAAATA TACCCGTGGG CCGCTGATTG CACTGGAGAT TTTGCGCATT GCCCTGGCCA TTTTCTTTGT AGGCTTCCTC ATTTTCCAGT TTTATAGTAC ATGGCTGGCC ATTACCATTG CTGTTGTGCT GATTGTTTCG GGTATGGTGA TCTTTTCAAG AAAGCTACAA GGTTTTTACA ACAGACTGGA AAGCCGCTTT TTACTGAACT TAAATGCCCG GGAAGCCCAA AATGCACAAC CCGAGATTTT GCCCTGGGAT ACCCACCTTG CTGAGCTGGT GGTAGCGCCA GAGTCTAAAC TGGTAGGCCA GACGCTCATA GAACTTTCCA TCAGGGAAAA ATACGGGGTG AATATCGCCC TGATAGAGCG TGGCAAGATT ATGATTCCTA CACCAGGGCG CGATGAAAGA TTATATCCCA ATGATAAGGT ATTGGTGATT GGTACTGATG CACAGCTGGC CATGATCAAG GAACTTTTTG AAGGAAGTGT GGATGAGCAT GAAGAAGCGG CCAATTTCCC GAAGAAGGAC ATGACCTTAC AAAAGATTGT GATCAATGCA AATTCGCCGG TATACGGACA AAGCATCCGC AGCTCGGGTA TCAGGGAAAC TACGCAGGGC CTGGTGGTAG GAATAGAACG CAATGGTGAG CGCATATTAA ATCCAGATTC GAATATGGTT TTTGAAAATG AAGATATTGT CTGGATAGTT GGGAACAATA AAAAGGTTCC TGAACTGCTG AAATAA
|
Protein sequence | MIHLPVLITD LGLILAAAGI TTLLFKRIKQ PLVLGYILAG LLVGPHIKFI PTVTDNESIH IWAEIGVIFL LFSLGLEFSF KKLVKVGGSA SITAIVEVVF MLLIGFVAGK AMGWATMDSI FLGGILSVSS TTIIIRAFEE LGVKHKKFAG LVFGVLIVED LVAILLLVLL STLAVSQQFA GAEMLVSILK LCFFLVLWFI GGIFLVPTFL KATKKLMNDE TMLVVSIALC LIMVLLAVKV GFSPALGAFI MGSILAETTQ AERIEHLTKS VKDLFAAIFF VSVGMLIDPG ILVDYAVPIL IITLATILGK FLSSGMGALL SGQPLKTSVQ TGLSLAQIGE FSFIIATLGV TLKVTSDFLY PIAVAVSAIT TFTTPYLIKA SEPFYFFLER NLPKKWVEGL NRYSSSTAGI TTLSDWKILL KSYTFNTIIH SVILIALVFL GAKYLQPFIT GNIINGNKGI IISLVVTLIF MTPFLWALAI RRIERKAYSH LWLNKKYTRG PLIALEILRI ALAIFFVGFL IFQFYSTWLA ITIAVVLIVS GMVIFSRKLQ GFYNRLESRF LLNLNAREAQ NAQPEILPWD THLAELVVAP ESKLVGQTLI ELSIREKYGV NIALIERGKI MIPTPGRDER LYPNDKVLVI GTDAQLAMIK ELFEGSVDEH EEAANFPKKD MTLQKIVINA NSPVYGQSIR SSGIRETTQG LVVGIERNGE RILNPDSNMV FENEDIVWIV GNNKKVPELL K
|
| |