Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3548 |
Symbol | |
ID | 8254669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4221621 |
End bp | 4222484 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644937199 |
Product | protein of unknown function DUF161 |
Protein accession | YP_003093801 |
Protein GI | 255533429 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.979757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGGGC ATATCAAAAC TAAAAAACTA AACTTTACCA AAAACATGTT TTTAATTACA TGCGGTATTG TGTCGGCCTG TTTTGGATTA AAAAGTTTTT TACTGCCCAG TGGTTTTATT GACGGTGGGG TTACCGGGAT CTCGCTGCTG ATCAGCAACA TCACCGGACT AAAACTCTCC TACCTCATCG TGGTCATCAA TATTCCCTTT GTAATTCTGG GTTACAGGCA AATAGGTAAA GTTTTTGCTA TCAAAACTTC TGTTGCGATT GCTTTGCTGG CCATTTTACT GATCGTTGCC CCTTTTAAAT CCATTACCCA TGACCCTTTA CTGATTGCCT TTTTTGGTGG ATTGTTTTTA GGTGGTGGCA TTGGCCTGGC CATGCGCGGT GGTTGTGTAA TTGATGGCAC CGAAGTATTG GCGTTGTACA TCAGTAAAAA AAGCACCCTT ACCGTTGGCA ACATTATCCT CATCCTGAAC ATCCTTATTT TTTCGGTAGC AGCCATATTT TTAGGTATGG ACAAGGCTTT ATATGCCATT CTTACTTATT TATCGGCCTC AAATACGGTT GATTATATTG TAAACGGAAT TGAGCAGTAT ACCGGCGTTA CCGTGATCTC GGAGAAAAAC GAGAATATTA AAAAATTCAT TATCCACCAG ATGAAAAGGG GGGTTACCAT ATATAAAGGC GAAGGTGGCT ACGGTATAAA AAAAGATATC GATATTCTAT ATACAGTGGT CACAAAGCTG GAAATGGGAA AACTGCAGAC CGCTATCAGG CAAATTGATC CGGATGCATT TGTTATACAA CAGCAGATTG CCGATATCAG AGGCGGGGTA GTAAAACGCC AGGCCTTACA TTAA
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Protein sequence | MRGHIKTKKL NFTKNMFLIT CGIVSACFGL KSFLLPSGFI DGGVTGISLL ISNITGLKLS YLIVVINIPF VILGYRQIGK VFAIKTSVAI ALLAILLIVA PFKSITHDPL LIAFFGGLFL GGGIGLAMRG GCVIDGTEVL ALYISKKSTL TVGNIILILN ILIFSVAAIF LGMDKALYAI LTYLSASNTV DYIVNGIEQY TGVTVISEKN ENIKKFIIHQ MKRGVTIYKG EGGYGIKKDI DILYTVVTKL EMGKLQTAIR QIDPDAFVIQ QQIADIRGGV VKRQALH
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