| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3542 |
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| Symbol | |
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| ID | 8254663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4215758 |
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| End bp | 4217728 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937193 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003093795 |
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| Protein GI | 255533423 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.11869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA CAAGCATTTC AGATAAAAAA TTAGCAGAAA TACAGAAGAT CCTGGAAATT
AGTCCGATGG GTGCTTTTCA GGCTGATACA GTAGGTAATT GTTTGTTTCT AAACCGGCAA
TGGGAAAATA TCTCAGGATT AAGTGTGGAG GAATCGCTTG GGAAAGGTTG GATGAGCATC
GTTTATGAGG ATGACATTGT GCTTATAAAC AATCTGTTAA AGGATGTGAT GGCGGAAGGA
AAAGAAATAT TCGATTTTGT TTATCGGATT CATCATCCTT CTGAAGGACT ACGCCAGCTT
AAAGTGAACG CGAAATTTAT TTTTGATGAC TATGGTGTTA TTTCCTACTA CATCGGTTTT
TTAGAGGACA TCACAGATCG CACCCAAAGC GAACTGGCGT TTCAGGAAAT CAAACAAAAC
CTGGAGCGCA GCAACCTGAT TCTGGATGTG AGTCAGGAAT TGAGTACCAC GGGTGGCTGG
GAATTTAATT TACTGACAGG AGAAGTGTTC TGGACAAAGC AGGTTTATGA AATTAATGGC
GTTGATGAGC AGACTTTTGT TCCTACTTTT GAAGGCGTAC TTTCGCGCTA CGAAGAAGGT
TATGCCCAGA TAATGGAACA ACAAGTAAAA GAGGCGATTG AAAAGCAAAT ACCTTACGAT
CTTGAACTCA GACTATGTAC GCCTGCTGGT GTAAGAAAAT GGGTTAGGGC CGTTGGTACA
CCCATTGTAG CAGACAATAA GGTGGTGGTG TTAAGAGGAG CCATTACAGA CATTACCCAA
AAAAAGGAAA TTGAATTGGA ACTACTTCGG GCAAAGGATA TTGCCGAACA TTCGGCAAAG
GCAAAAACGG ATTTTCTTTC GGTAATGAGC CATGAAATCC GCACACCTTT AAATGGAATT
ATTGGTATTG CCAATTTGTT GAAACTTAAA CATACCATGG ACCAGGAAGA GTATGTGCGT
AGCCTGATCT TTTCGGCCGA CCATCTGCTG CAGCTCATTA ATGATATCCT GGACCTTACC
AAAATAGAAA GTGATAAGCT GGAACTGGTT TTGGCAGAAG TGAACATTTT TGAGCTGGTA
AGGAATATCA AAAATCAGTT TAAATCGCTG GCCGAGGCTA AAGGCATTGT GGTGAAAAGC
TTTATTGATG ATGATATTCC ACAAAGACTG ATTGCCGATC CGGTAAGGCT TGGGCAGATT
TTGAACAACC TGATCAGCAA TGCTATTAAA TTTACAGAAA GTGGAGCGGT GACCATTACA
TTGAGCCTTG TGGCATTGAC AGCTAACAAA GCTAATGTAC ATTTTTCTGT AAAAGATACC
GGAATGGGTA TTCCGGAGGA GTTACATGAA ACCATTTTTG AAAGCTTTAA GCAAGTACAA
CAGGATGTGC ACCGTAAACA TACGGGAACA GGTTTAGGTT TGGCTATTAC CCAGAAATTG
GTGGAACTAC ACGATGGGCG CATTTTGCTT AAAAGTACAG CCGGCCAAGG AACAGAATTT
TATTTTGAAC TGAATTTTGA TTTAGCTACT GACGAGAATT CGCCAGGGAC TTTCAGGCCT
GGGCCTGAAA TTACGGTATA CGAAGGTAGG TTAAAAGGTT TGCGCATTTT ATTTGTCGAA
GACAACCCAA TTAATGTAAT GGTGGCTAAA AACCAGCTGG AATACTTCGG CAGCGTACCA
GACTGTGCTT ATAATGGAAA GGAAGCTCTT GCGTTGTTAA ATGACAACCA GTATGATGTG
GCCTTGCTGG ACCTGCATAT GCCCGAAATT GATGGTTATG CTTTGGCGGA TCTTATACAG
CAGCAGTACC CCGGAATACA CATTGTTATT TTTACTGCCG ATATTATGAC AGAGGTGAAA
TTGAAGCTGG CTAAAATGCA TATTTTTGAC ATTCTGAACA AACCTTTTTC ACCCGAAAGA
ATGTTTGAAG TGTTATACAA TGTAGCTAAG AACCGGGGTG TTTTAATATG A
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| Protein sequence | MNNTSISDKK LAEIQKILEI SPMGAFQADT VGNCLFLNRQ WENISGLSVE ESLGKGWMSI
VYEDDIVLIN NLLKDVMAEG KEIFDFVYRI HHPSEGLRQL KVNAKFIFDD YGVISYYIGF
LEDITDRTQS ELAFQEIKQN LERSNLILDV SQELSTTGGW EFNLLTGEVF WTKQVYEING
VDEQTFVPTF EGVLSRYEEG YAQIMEQQVK EAIEKQIPYD LELRLCTPAG VRKWVRAVGT
PIVADNKVVV LRGAITDITQ KKEIELELLR AKDIAEHSAK AKTDFLSVMS HEIRTPLNGI
IGIANLLKLK HTMDQEEYVR SLIFSADHLL QLINDILDLT KIESDKLELV LAEVNIFELV
RNIKNQFKSL AEAKGIVVKS FIDDDIPQRL IADPVRLGQI LNNLISNAIK FTESGAVTIT
LSLVALTANK ANVHFSVKDT GMGIPEELHE TIFESFKQVQ QDVHRKHTGT GLGLAITQKL
VELHDGRILL KSTAGQGTEF YFELNFDLAT DENSPGTFRP GPEITVYEGR LKGLRILFVE
DNPINVMVAK NQLEYFGSVP DCAYNGKEAL ALLNDNQYDV ALLDLHMPEI DGYALADLIQ
QQYPGIHIVI FTADIMTEVK LKLAKMHIFD ILNKPFSPER MFEVLYNVAK NRGVLI
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