| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3537 |
|---|
| Symbol | |
|---|
| ID | 8254658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4207326 |
|---|
| End bp | 4209278 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644937188 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003093790 |
|---|
| Protein GI | 255533418 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACA AATTATTTAA AGGCAGGTAT AGCAGCTTGT TCTCTTTTCT ACTTGTCTTT
ATTTTTAGCT CTTTCCTGAT CAGGACTGTA TTGCTCTTTA TCTCAATTGG AAAAGCAGAT
TTTACTATTT TAGGCGTAAT TCAGATTTAC CTGCTGGGCT TTGTTTATGA CCTGGCTGTA
GGTTTGTTTT TAACTGGCTT GTATAACCTG TACCTGCTTT TTCTGCCAGG TAAATGGGCC
AATTCTATAG CAAATAAGGT CCTTACTTAT GCGGGGCTTT TTATCATCTT GCTCATTTCT
TTCTTTTCTT TTTTTGCCGA ACTTACTTTT TGGCAGGAAT TTGAGAGCAG GTTTAATTTT
ATTGCTGTAG ATTACCTCAT CTACACTACC GAAGTAATCA ATAACATCAT TGAATCGTAT
CCTTTGCCAT TACTGATCAG CGGGATATTG CTGCTGGTGG TATTGGTGTT CTGGTTGTTT
ACCAAAAAGA AGGTCTTCCG GTATACCTTT CAGTCGGCCA TGCCATTTAA ACAAAGAATA
GCAATATCTG GTGTTTTATT GCTGGCAACC ATCGTTTATC CGCTGGTGCT CAGCAATTCT
TTTGCAGAAT CTGGTACCAA TCGTTACCAG AACGAGCTTT CAAAAGCAGG TATCTATTCC
ATTTTTGCAG CCTTTAAAAA CAATGAACTT AATTATAAGG ATTTTTATGC CTTGCTTCCT
GACGATAAAG CTTTTGCCCT GATGCGAAAA CAGCTGCAGG ATCGGCACAG TGCATTTGTC
AGTACAGGCC ATTCGATAAA GAGAACAGTT AAGAGTGACA AACCTTTGTA TAAACCCAAT
GTGATCATGA TTACGGTGGA GAGCTTGAGT GCAGATTTTC TTGGGCATTT TGGCAATACA
CAGCATTTAA CCCCGGTACT GGATTCGCTG TCGCAACACA ACCTGGTATT TAACAATATG
TTTGCAACGG GCACCCGTAC CGTAAGGGGA ATGGAAGCCC TCTCGCTTGC TATTCCTCCA
ACACCGGGAA GCAGTATTGT AAGGCGAAGT AAAAATGAGA ACCTGTGTAC TGTTGGTTAT
ATTTTTCAAC AGGCAGGTTA TACCCGGACT TTCTATTATG GTGGCGATGG TTATTTCGAT
AACATGAATG AGTATTTTGG CAGTAATGGT TTTGACATTA CTGACAGGGG CAGGAACATT
AAGGTAGGCG AGAGTTACCT GACCAAAAGG ACCATCATTC AGGATAAACA GGTAACCTTT
GAAAATGCAT GGGGAATATG TGATGGCGAT CTTTTTGATG CCGTGATAAG GGGTGCCGAC
CAAGATTACC AGAATGGTAA GCCTTTCTAC AATTTTGTAA TGACCACCTC TAACCACAGG
CCTTTTACTT TTCCTGATGG TAAAATTGAG GCCAAAGTGA AGAACAGGGA GGCTGCAGTG
CGGTATACAG ATTTTGCTAT AGGCGACTTT TTGAAAAAGA TGCAGAAGAA GGCGTGGTTT
AAAAATACAG TGGTGATTAT TGTGGCCGAC CATTGTGCGG CCAGTGCGGG AAAAAATGAG
ATCGACATCA GTAAATATCA CATTCCCTGT ATTGTACTGA ACCTGCCGGT AAAAGGTAAA
GTAGCAATTG ATCAACTTTG CTCGCAGATA GACCTGTACC CCACTTTGTT CGACCTGCTG
GGCTGGAATT ACGAGAGTAA CCTGTATGGA CAGAATGTTT TAGAACCAGG CTACCAGCCC
CGTGCTGTAT TAGGTACCTA CCAACAGCTG GGATATTTAA AGCAGGACAG CCTGGTTATA
TTGGGGCCAC AGCAAAAAAC CGAGACCTTT ATTTATCACC GGGAGAACAA TGAACAGGTA
CCCAATCCGT TGTCCAGAAC GGTTATTGAG CAGGCCATGG CCAATTATCA AACGGCTTAC
GACCTGTTTA AAAACGGTGG CCTGCACCAG TAA
|
|---|
| Protein sequence | MLNKLFKGRY SSLFSFLLVF IFSSFLIRTV LLFISIGKAD FTILGVIQIY LLGFVYDLAV
GLFLTGLYNL YLLFLPGKWA NSIANKVLTY AGLFIILLIS FFSFFAELTF WQEFESRFNF
IAVDYLIYTT EVINNIIESY PLPLLISGIL LLVVLVFWLF TKKKVFRYTF QSAMPFKQRI
AISGVLLLAT IVYPLVLSNS FAESGTNRYQ NELSKAGIYS IFAAFKNNEL NYKDFYALLP
DDKAFALMRK QLQDRHSAFV STGHSIKRTV KSDKPLYKPN VIMITVESLS ADFLGHFGNT
QHLTPVLDSL SQHNLVFNNM FATGTRTVRG MEALSLAIPP TPGSSIVRRS KNENLCTVGY
IFQQAGYTRT FYYGGDGYFD NMNEYFGSNG FDITDRGRNI KVGESYLTKR TIIQDKQVTF
ENAWGICDGD LFDAVIRGAD QDYQNGKPFY NFVMTTSNHR PFTFPDGKIE AKVKNREAAV
RYTDFAIGDF LKKMQKKAWF KNTVVIIVAD HCAASAGKNE IDISKYHIPC IVLNLPVKGK
VAIDQLCSQI DLYPTLFDLL GWNYESNLYG QNVLEPGYQP RAVLGTYQQL GYLKQDSLVI
LGPQQKTETF IYHRENNEQV PNPLSRTVIE QAMANYQTAY DLFKNGGLHQ
|
|---|
| |