| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3535 |
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| Symbol | |
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| ID | 8254656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4203170 |
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| End bp | 4204804 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937186 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003093788 |
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| Protein GI | 255533416 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.269906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTA TTCTAAGCAA TATTTTTTCT TTGCTGCTCA TTTTAACTTT TGCAGCATGT
AAAAACCAAT CTTCCAATGC AGAAAAAAAG GTTTTTAGCA TGAACCTTGA TCAAAATGTG
ACATCCCTTG ATCCCGCTTT TGCGCGCAAC CAGAATGCCA TCTGGATGAT CAACCAGATT
TTTAACGGAC TGGTACAGAT TGACAGTTCC TTAAATACCT TGCCCTGTAT TGCTAAAACA
TGGGAAATTT CGAAAGACGG CTTAACCTAC ACCTTTCACC TCCGCAATGA TGTTTATTTT
CATGACGACC CGATTTTTCC GGGTGGCAAA GGCCGTAAAG CTGTTGCAGC AGATTTCAGA
TACAGCTTTT ACAGGCTTAT AGACCCAAAA GTGGCTTCAT CCGGGGGATG GATCTTCAGC
GATAAGGTAA AAGACATCAA TAGCTTTATT GCGGTAAATG ACACGACTTT CCAGGTAAAA
CTCATGAAGC CTTTTCCTGC TTTTATGAAC CTGCTCACTA CGCAGTACTG CTCAGTGGTT
CCGAAAGAAA TTGTAGAGCA TTATGGTAAG GATTTCCGTA GTCACCCTAT AGGCACGGGT
CCGTTTAAAT TCAAGTACTG GAAAGAGGAT GAGATACTGG TGATGTTAAA AAACGAACAT
TACTGGGAAA AAGAAGGCGA CCGGCAATTG CCCTACCTGG ATGCGGTAAA AGTTACTTTT
ATTAGCGACA AGCAGAGTGC CTTCATGAAT TTCATTAAAA AGGACCTGGA TTATTTTGAT
AAGGTTGATG GCAGCTACCG TGACGATATT TTAACCAAAA GCGGAAAAAT GACCAGTAAG
TACAAAGGCA AATTCAAGCT CAGAAAAGGC CCTTATCTGT GCACAGAATA CGTAGGTATC
CTGGTAGACA CCTCGAAGGC CATTGCTAAA AATTCGCCCT TAAAATATAA AAAGGTAAGA
CAGGCCATTA ATTATGCGAT TGATAAACCC AAGCTGATCA AATATTTAAG GAACAGCATC
GGCATGCCGG CCACCTCTGG ATTTATCCCG CATGGCATGC CTGGTTTTGA CAGTACAGCG
GTTAAAGGTT ACCATTACGA ACCGCAAAAA GCAGCCCGCC TACTGGCCGA AGCTGGTTTC
CCGAACGGAA AGGGTATGCC GCAGATTACC CTCAGCACTT CTACCACTTA TAAAGACCTG
ATCGAATTTA TTCAGGGGGA GCTAAGTGCC ATAGGCATCA ATGTAAAGGT TGATGTAAGC
CCAAGTGCCA GTCTGCGCGA CCTGATCTCA AAAAATGGGG TAAACTTTTT CAGGGGCTCC
TGGATTGCCG ATTATCCGGA TGGCGAGAAC TACCTGGCCA TGTTCTATTC CAGGAACAAA
GTACCGAACG GCCCCAATTA TACAGGTTAT TTTAACGATG AGTTTGACCG TCTTTTTGAA
CAGAGCTATT ACGAAAGCGA CAACCAAAAG CGTTACCTGC TGTATCAGAA AATGGATAGA
ATGATCGTAG AATATGCCAA CGTAGTGCCG ATACTCTACG ATCAATCGCT TGTGATGACA
CAGAACAATA TCAGTGGCCT GCAGGTGAAT GCGTTAAACC TGATGATATT GAAGACTGTC
AGGAAGGAAA ATTAA
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| Protein sequence | MRRILSNIFS LLLILTFAAC KNQSSNAEKK VFSMNLDQNV TSLDPAFARN QNAIWMINQI
FNGLVQIDSS LNTLPCIAKT WEISKDGLTY TFHLRNDVYF HDDPIFPGGK GRKAVAADFR
YSFYRLIDPK VASSGGWIFS DKVKDINSFI AVNDTTFQVK LMKPFPAFMN LLTTQYCSVV
PKEIVEHYGK DFRSHPIGTG PFKFKYWKED EILVMLKNEH YWEKEGDRQL PYLDAVKVTF
ISDKQSAFMN FIKKDLDYFD KVDGSYRDDI LTKSGKMTSK YKGKFKLRKG PYLCTEYVGI
LVDTSKAIAK NSPLKYKKVR QAINYAIDKP KLIKYLRNSI GMPATSGFIP HGMPGFDSTA
VKGYHYEPQK AARLLAEAGF PNGKGMPQIT LSTSTTYKDL IEFIQGELSA IGINVKVDVS
PSASLRDLIS KNGVNFFRGS WIADYPDGEN YLAMFYSRNK VPNGPNYTGY FNDEFDRLFE
QSYYESDNQK RYLLYQKMDR MIVEYANVVP ILYDQSLVMT QNNISGLQVN ALNLMILKTV
RKEN
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