Gene Phep_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3527 
Symbol 
ID8254648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4196497 
End bp4197582 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content49% 
IMG OID644937178 
ProductMalate/L-lactate dehydrogenase 
Protein accessionYP_003093780 
Protein GI255533408 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTTT ACACCTTTAC CGAGCAACAT TTACGTCAGT TTACCGAAAA TGTATTTATA 
CAGATGGGTT GTCCGGATAC CGACGCAAAA CTGGCAGCCG ATGTTTTACT GCGTTCTGAT
TTAAGGGGCA TTGATTCGCA TGGCGTAGCA CGCTTAAGTG GTTATGTAAG GTTATGGGAA
AAGAAACGCA TCAATGCCCG GCCGGTTGTA AAAGTAGTGC ACGAAACAGC CACTACGGCA
ACAGTTGATG GCGATAGTGG CCTGGGCCTG GTTGTAGCGC CTTTTGCCAT GAAAATTGCG
ATAGAAAAAG CGCGGACTTA TGGCAGCGGA TGGGTTTCGG TAAAAAACTC CAATCATTTT
GGTATAGCAG GCTACCATGC TTTAATGGCA GTAGAACAGG ACATGATCGG TATCAGCATG
ACCAATGCCA GTCCGCTTGT GGCCCCTACC TATACTACAG AACGCCTGCT GGGCACCAAC
CCCATGTGCT ATGCTTTTCC TGCCGGCAAA TATCCACCGG TTGTGGTAGA TATGGCTACT
GCTGCAGCTG CAAACGGAAA ACTGGAAATT GCACAAAGGG CAAATACAGC AATACCGGAA
GGCTGGGTAC AGGATGCAGC AGGAAAAACA TCAGTAAACC CACACGAACT TAAAGCAGGT
GGCTCACTCC TGCCCCTGGG CAGCGATAAA GATCATGGCA GTCATAAGGG CTATGGCCTG
GGTGCAACGG TTGACATTTT ATCTGCAGTG CTTTCAGGTG CCAATTATGG CCCCTGGGTG
CCCCCTTTTG TAGCTTTTCT TGATCCGCCC AATGATCCTG TTGGCGAAGG CATCGGCCAT
TTTTTTGGCG CCATGCGTGT AGATGGTTTC AGACCGGCGC AGGATTTTAA AGAGCACCTG
GACAACTGGG TTGCACGCTT TAAAAGTGCA GCGCCTATAG ACCAGGAGAA ACCCGTTATC
ATTCCCGGTG AACCGGAATA TGCTGCGGAA AAGGAGCGCA AAAAAAACGG CATCCCTTTA
ATAGATGCCG TTGTAGATGA TTTAAATGCA CTTGCCCTTA AACTGGGCAT TGCTGGTTTA
TCCTGA
 
Protein sequence
MIFYTFTEQH LRQFTENVFI QMGCPDTDAK LAADVLLRSD LRGIDSHGVA RLSGYVRLWE 
KKRINARPVV KVVHETATTA TVDGDSGLGL VVAPFAMKIA IEKARTYGSG WVSVKNSNHF
GIAGYHALMA VEQDMIGISM TNASPLVAPT YTTERLLGTN PMCYAFPAGK YPPVVVDMAT
AAAANGKLEI AQRANTAIPE GWVQDAAGKT SVNPHELKAG GSLLPLGSDK DHGSHKGYGL
GATVDILSAV LSGANYGPWV PPFVAFLDPP NDPVGEGIGH FFGAMRVDGF RPAQDFKEHL
DNWVARFKSA APIDQEKPVI IPGEPEYAAE KERKKNGIPL IDAVVDDLNA LALKLGIAGL
S