| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3525 |
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| Symbol | |
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| ID | 8254646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4193524 |
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| End bp | 4194858 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937176 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_003093778 |
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| Protein GI | 255533406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAA AAACACCGTC AAAGATAGTA CCTGTTAAAA AACCTAAAAT CAATGTAATT
ACATTGGGTT GTTCAAAAAA CACCTACGAT TCGGAAGTTT TAATGGGTCA GCTGCGCGGC
AATAGCATGG ATGTGGTGCA TGAGGCCAAT AAAATGGGTA AAGACGATAT CGTAGTGATC
AATACCTGCG GTTTTATTGA CAATGCAAAA CAGGAATCTA TTGATACCAT ATTGCAATAC
AGTCAGCTTA AAGAAGAAGG AAAAGTGGGA AAGGTTATTG TAACCGGATG TTTATCGGAG
CGTTATAAAC CAGAACTGGA AGCTGAAATT ACCAATGTTG ATGCTTTTTT TGGCACCAAC
GATTTAAATA ACCTGCTACA CGCTTTAGGT GCAAACTATA AGCATGAGCT GATTGGCGAA
CGTTTACTGA CTACGCCTTC CCATTTTGCC TATTTTAAAA TAGCAGAAGG CTGTAACCGC
CCCTGCTCTT TTTGCGCCAT CCCGCTTATG CGGGGCAAGC ACGTTTCGCG CGACATGCAG
GAACTGGTAA ATGAAGCTAA AATATTGGCT GCAGGGGGTA CCAAAGAACT GATATTAATC
GCACAGGACC TCACTTATTA TGGCCTGGAT ATTTACGGTA AACGTAACCT GGATGAACTG
CTGCGCAGAT TGTCTGATGT GAACGGTATT GAGTGGATCA GGTTGCAATA CGCGTACCCT
TCCGGTTTCC CAATGGAAAT CCTGGATGCC ATGAACGAAC GCGAGAACAT CTGCAAATAC
CTGGACATGC CTTTACAGCA CATTACAGAC AATATGTTGA AATCGATGCG CCGTGGCATT
ACCAAACAAA AAACCATAGA CATTGTAAAC CAGATCAGGG ATAAGGTACC GGGCATTGCC
ATGCGTACCA CCTTAATTTG CGGTTACCCG GGCGAAACGG AACAGGATTT TGAGGAAATG
ATGGATTGGG TGGAAGAAAC CCGTTTTGAC AGACTTGGCT GTTTCACTTA CTCGCATGAA
GAAAAAACCC ATGCCCACAG TTTGGTAGAT GATGTGCCTG ATGAAATAAA ACAGGAACGT
GTAGACGCCA TTATGGAACT GCAACAGGGA ATTTCGTACG ACATCAACCA GGAAAAGGTT
GGCAAAACCT ATAAGGTGCT GGTTGACAGA AAAGAAGGCG CCTTCTTTAT CGGCCGTACT
GAATTTGACT CGCCGGAGGT AGACAACGAA GTTTTAATTG ATGCCAGCAC GGGCTATGCC
GCCAATGGCA GTTTTGTAAA GGTGAAGATT GACCGGGCGG AAGATTTTGA TCTATATGGA
CAGATTGTAA AATAA
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| Protein sequence | MNTKTPSKIV PVKKPKINVI TLGCSKNTYD SEVLMGQLRG NSMDVVHEAN KMGKDDIVVI
NTCGFIDNAK QESIDTILQY SQLKEEGKVG KVIVTGCLSE RYKPELEAEI TNVDAFFGTN
DLNNLLHALG ANYKHELIGE RLLTTPSHFA YFKIAEGCNR PCSFCAIPLM RGKHVSRDMQ
ELVNEAKILA AGGTKELILI AQDLTYYGLD IYGKRNLDEL LRRLSDVNGI EWIRLQYAYP
SGFPMEILDA MNERENICKY LDMPLQHITD NMLKSMRRGI TKQKTIDIVN QIRDKVPGIA
MRTTLICGYP GETEQDFEEM MDWVEETRFD RLGCFTYSHE EKTHAHSLVD DVPDEIKQER
VDAIMELQQG ISYDINQEKV GKTYKVLVDR KEGAFFIGRT EFDSPEVDNE VLIDASTGYA
ANGSFVKVKI DRAEDFDLYG QIVK
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