| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3517 |
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| Symbol | |
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| ID | 8254638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4187250 |
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| End bp | 4189148 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937168 |
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| Product | acetate/CoA ligase |
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| Protein accession | YP_003093770 |
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| Protein GI | 255533398 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTA AATCATTTGA AGAGTATCAA AAAACCTATC AGTATAGTGT AGATTACCCT
GAGCAGTTTT GGGAGGGTAT TGCCAATAAT TTTCAGTGGA GAAAAAAATG GAATAAAGTG
TTGTCCTGGA ATTTTTCTGA ACCTAATATT AAATGGTTTG AAGGGGCTAA ATTAAACATC
ACTGAAAACT GTTTAGACCG TCACCTCGCA GAAAATGGAG ATAAACCAGC CATTATCTGG
GAACCAAATG ATCCTCAAAA AGAAAGTATT ACCTTAAGTT ATAAAATATT ACATGAGCAG
GTTTGCCGTT TTGGCAACGT GCTGAAAAAG AATGGCGTGA AAAAAGGCGA CCGGGTATGT
ATTTACATGC CTATGGTGCC TGAACTGGCT GTTGCTGTAC TGGCCTGTGC CCGTATTGGG
GCAGTACATT CAGTAGTATT TGGTGGTTTC TCTGCCAAAT CTATTGCCGA CCGTATCAAT
GATGCAGAAT GTAAAGTGGT TATCACAGCC GATGGTGCAT TTAGAGGAAA CAAGCAGATT
CAGCTGAAAG AAGTAATTGA CGATGCCCTG ATTGGCTGCC CGACAGTGGA AAGGGTAATC
GTTTTAACCC ATACCCGTAT GGCCGTATCC ATGCTGAAAG GACGTGACGT ATGGTGGGAA
GATGAAATTA AACTGGTAGA TACCAATTGC CCGGCTGAAG AAATGGATGC GGAAGACCTG
CTGTTCATTT TATATACTTC GGGTTCAACC GGCAAACCTA AGGGGGTGGT ACATACCATT
GGCGGTTACA TGGTATATGC TGGATATACC TTCTCTAACG TATTTAACTA TCAGCCGGAC
GAAGTGTTCT TCTGTACGGC AGATATCGGC TGGATTACCG GCCACTCTTA CATTGTATAC
GGGCCGCTCT CGCAGGGCGC TACCACTTTG ATGTTCGAAG GTATCCCTAC TTTCCCTGAT
GCATCGCGCA TGTGGCAGGT GGTAGAAAAA CATAAAGTAA ACATTTTATA TACTGCACCA
ACGGCCATTC GTTCCTTAAT GAGCTTTGGT GAAGAACCGC TTAAAGGAAT AGACCTGAGC
TCTTTAAGGG TATTGGGGTC GGTAGGTGAG CCTATAAATG AAGAGGCATG GCACTGGTTT
GACGAGAACA TAGGCAAAAG CAAATGTCCG ATTGTAGATA CCTGGTGGCA AACGGAAACA
GGCGGCATTA TGATCTCGCC GATCGCTTAT GTTACGCCAA CCAAACCAAG TTTTGCTACG
CTACCTTTGC CGGGTATCCA GCCGATGCTG GTAGATGAGC AGGGTAAGGA AATTGAAGGC
AATGGCGTAA ATGGAAACCT GTGTATCAAG TTCCCATGGC CTGGCATGCT GCGCACCACT
TATGGCGATC ATGAGCGTTG CAAGCTAACT TATTTCTCGA CCTACAAAGA CCTTTATTTT
ACAGGTGATG GTTGTTTAAG GGACGAGGAT GGTTATTATC GCATTACCGG CAGGGTAGAT
GATGTGATCA ACGTATCTGG CCACCGCATT GGTACAGCAG AGGTAGAGAA TGCCATCAAC
ATGCATGCCG GTGTGGTAGA AAGTGCAGTG GTAGGTTATC CACATGATGT AAAAGGGCAG
GGTATTTATG CTTTCGTAAT TAACCCTAAT GTCCATAATG ATGAAGACCT TACCCGTAAA
GATATCCTGC AAACGGTAAC CCGGGTTATC GGCGCTATTG CAAAACCGGA TAAGATCTTG
TTTGTATCGG GTTTGCCTAA AACACGCTCG GGTAAAATCA TGCGCCGCAT TTTAAGGAAG
ATCGCTGAAG GCGAAACTTC TCAGATCGGC GATACCTCTA CTTTATTGGA TCCTGCAGTA
GTAACGGAGA TCATAGAAAA AGCAGGACAG CTAAAATAA
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| Protein sequence | MQIKSFEEYQ KTYQYSVDYP EQFWEGIANN FQWRKKWNKV LSWNFSEPNI KWFEGAKLNI
TENCLDRHLA ENGDKPAIIW EPNDPQKESI TLSYKILHEQ VCRFGNVLKK NGVKKGDRVC
IYMPMVPELA VAVLACARIG AVHSVVFGGF SAKSIADRIN DAECKVVITA DGAFRGNKQI
QLKEVIDDAL IGCPTVERVI VLTHTRMAVS MLKGRDVWWE DEIKLVDTNC PAEEMDAEDL
LFILYTSGST GKPKGVVHTI GGYMVYAGYT FSNVFNYQPD EVFFCTADIG WITGHSYIVY
GPLSQGATTL MFEGIPTFPD ASRMWQVVEK HKVNILYTAP TAIRSLMSFG EEPLKGIDLS
SLRVLGSVGE PINEEAWHWF DENIGKSKCP IVDTWWQTET GGIMISPIAY VTPTKPSFAT
LPLPGIQPML VDEQGKEIEG NGVNGNLCIK FPWPGMLRTT YGDHERCKLT YFSTYKDLYF
TGDGCLRDED GYYRITGRVD DVINVSGHRI GTAEVENAIN MHAGVVESAV VGYPHDVKGQ
GIYAFVINPN VHNDEDLTRK DILQTVTRVI GAIAKPDKIL FVSGLPKTRS GKIMRRILRK
IAEGETSQIG DTSTLLDPAV VTEIIEKAGQ LK
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