Gene Phep_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3510 
Symbol 
ID8254631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4178393 
End bp4179997 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content48% 
IMG OID644937161 
ProductNa+/H+ antiporter 
Protein accessionYP_003093763 
Protein GI255533391 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACATG CCAACCTTCT TTTAATCCTT GCACTGTTTT TTGCCATGGC CCTGCTCTTT 
CTGCTCAGTC AGCGCTGGAA GATCTCCTAC CCTATATTCT TAGTGATTGG CGGGCTCGGC
ATCAGTTTTA TACCTGGCAT GCCGGTCATC AACGTCAATC CCGACATCGT ATTCCTGATC
TTTTTGCCCC CGCTCTTGTT CGAGGCCGCA TGGTATACTT CCTGGAATGA TTTCTGGAAA
TGGCGGCGCT CCATCTTTTC GATGGGCTTC GGCCTGGTAC TTATTACTTC CTTGGCCATA
GCCTATTTTT CGGTCAGCAT TATCCCGGGC TTTACCCTTG CATTTGGCTT TCTGCTGGGC
GGGATCATTT CACCTCCCGA TGCTGTAGCC GCCACTTCAG TATTAAAGGG TGTAAGCATG
CCCAAAAGAG GCTTAACCAT ACTGGAAGGC GAAAGCCTGG TCAACGATGC CGCATCCCTC
ACCGTGTTCA GGTTTGCACT TGCAGCCATC CTTACCGGTA AGTTTGTATT GCAGGATGCC
GTTACCGATT TCTTCATCCT GGCCATCATG GGTGTTGTGG TGGGCCTGGT TATTGCTCAC
CTCCTGTACT TTGTATTGAA ATACTGGGCC AAATCATCCA ATATCACTAC CCCCATCACC
TTAATAGCTC CCTATCTGAT GTATATCGTA GCAGAAGAAT TTCACTGGTC GGGCGTATTG
GCTGTAGTCA GCGGTGGTTT ATTCCTTTCT TTCCGTTCAG GTGATTTTCT AAATTACCAT
ACCCGCATAC AGGGCAAGGA AGTATGGGCC ACTGTAGGTT TTCTGCTGAA CGGCTTTGTA
TTTATCCTGA TCGGACTGGA ACTGCCGGTC ATTGTGGCCG GACTGGAGGG CTATTCCATG
GAAGAAGCCA TTAAATATGC CCTCATCATC AGTGCCATTG TCATCATTGC CAGGATCATA
CTGGTCTATG CTTCGGCATT TATTCCCCGG TTTTTAAGTC CGCGTATCCG CAAAAGAGAA
AAAAGTCCGG GCCTGAAACT GCCCTTCATC ATTGGCTGGG CGGGTATGCG TGGCGTAGTT
TCCCTGGCTT CTGCACTGGC CATACCGCTT ACCTTAAATA CCGGGGCGGC ATTTCCGCAC
CGCAACATGA TCCTTTTTAT CACCTTTGTA GTTATCCTGG TTACGCTGGT ATTCCAGGGC
CTAACCCTGC CGGTGTTCCT CAGGGTACTT AAAGTGGAGG AAATTGACGA GCACATTCCC
GAAGATGAAC AGCTGGAAAC CATCCGCATG CAGCTGGCAC AAGAATGTGT AAACTACCTT
AACCAGCATT ACAGCAACGA AATGAGCCAG TTTGAAACCA TCGCCCGCGT TAAGGAGCAG
CTGGAAAGAA GCATCAGGGC TACTGAACGC ACTTTAATAG CGCAATCACA AAAAGAAGAG
GTGGTATCGG TAAGAAGGCT TTACCGACAG ATCATGCTGG AACTGATTGA GCTGAGAAGA
AAGGGATTGA GAAAAATGAA AGCCACAAAA AAATACGACC ATGAAGTACT GCGTGATATG
GAAGACAACC TGGACCTGGA AGAAGCGCGC TTAAACAAGC ATTAA
 
Protein sequence
MIHANLLLIL ALFFAMALLF LLSQRWKISY PIFLVIGGLG ISFIPGMPVI NVNPDIVFLI 
FLPPLLFEAA WYTSWNDFWK WRRSIFSMGF GLVLITSLAI AYFSVSIIPG FTLAFGFLLG
GIISPPDAVA ATSVLKGVSM PKRGLTILEG ESLVNDAASL TVFRFALAAI LTGKFVLQDA
VTDFFILAIM GVVVGLVIAH LLYFVLKYWA KSSNITTPIT LIAPYLMYIV AEEFHWSGVL
AVVSGGLFLS FRSGDFLNYH TRIQGKEVWA TVGFLLNGFV FILIGLELPV IVAGLEGYSM
EEAIKYALII SAIVIIARII LVYASAFIPR FLSPRIRKRE KSPGLKLPFI IGWAGMRGVV
SLASALAIPL TLNTGAAFPH RNMILFITFV VILVTLVFQG LTLPVFLRVL KVEEIDEHIP
EDEQLETIRM QLAQECVNYL NQHYSNEMSQ FETIARVKEQ LERSIRATER TLIAQSQKEE
VVSVRRLYRQ IMLELIELRR KGLRKMKATK KYDHEVLRDM EDNLDLEEAR LNKH