Gene Phep_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3509 
Symbol 
ID8254629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4176721 
End bp4178037 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content43% 
IMG OID644937159 
ProductDienelactone hydrolase 
Protein accessionYP_003093762 
Protein GI255533390 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TATTATTGCT GTTTTTAGCG CTTTTCATTT CTACTGCCTC ATTTTCGCAG 
GGTATCCTGA ATCTTTTTGG TCGTTCACAG GACTTGTTCA AGCTCTTGTC GGAAGATAAA
TATACCGAGG CCTACAGTTA TTTTGATCCG GCTTTCCAGG CCAAGGTAAC AGAAGCCAAT
ATAAAAGACC TGTGGGCAAA ACTCTCAGAG AAATTTGGTA AGATGGAAAA TGCAGGGGTG
GTAAGCAGCA AAACAGAAGG AGATTTTTAC ACAGTTATCC TTGAAGTGAA GTTTGCCAAT
GATTCACAGA ATTTTTTACT GGCCTTTAAT AAAACAGAAA AAATAGTTGG ACTTTACCTG
CAACCGAAAA GCTCTGCTGC TGCTTATACG CGGCCGGTTT ACGCCGATAC TGCTTTGTAT
AAAGAAAAAG AGATTTATGT AAAAACACCG GGTCATAGCC TGGTTGGTAT GTTAACTGAG
CCCAAAAAGG GGAGTGGCTA TCCGGTAGTG GTATTGGTGC ATGGCTCTGG GCCCCAGGAT
ATGGATGAAA CCATGGGCCC CAACAAGCCC CTGAAAGATC TTGCGCTGGG CCTGGCTTCC
AAAGGGATCG CCAGCATACG CTATGTGAAA AGGACAAAGG TCTATCCGAT GGATTTTGTA
GGTGCAAATA CCGTTAAGGA AGAAGTTTTG GATGATGCAC TTGCTGCCAT TGCCCTGGCC
AGGACCCTGC CTGAAGTAAA TAAAAAACAG CTCTATCTGT TTGGCCATAG CTTAGGCGGA
ATGCTTGCAC CCAGAATAGC CCTGCTTGCG CCTGATCTGA ACGGTATTTT ACTGGCTGCT
GCCCCGGCAA GGTCTTTAAC AGATATTATT GTTGAACAGA ACAGGTATTT TTTTGAACTT
GCAAAAGATA CAACGGCTGC AGGAAAACTG ATGCTCGATA GTGTGAACAA AAAGCTGGAT
GTAACCAGGA TTACAAAACT GGGGACTATA AAAGCCGATT CTGCTTTATT TGGATTGCCC
GCCGCTTACT GGATAGATCT GAACAATTAC AAACAGGTAG AAACTGCTAA AAAGTTGAAA
CAACGCATTT TTGTTGCGCA GGGTGGCAAC GACTTTCAGG TTTCAGTAAC CGATTATAAC
CTGTGGAGTG CTGCTTTAGG AAAGAAAAAA AATGCTACAC TTAAGTTATA TCCTGACCTT
AACCATCTGT TGAGTTCTCA GACAGAAAAA GGTACTTTGC AGCAATATGA CGGCCCGGCA
AATGTGTCTT CAGTATTGAT TGATGATATT GTGGCCTGGA TAAAAGCAGG GACCTGA
 
Protein sequence
MKKILLLFLA LFISTASFSQ GILNLFGRSQ DLFKLLSEDK YTEAYSYFDP AFQAKVTEAN 
IKDLWAKLSE KFGKMENAGV VSSKTEGDFY TVILEVKFAN DSQNFLLAFN KTEKIVGLYL
QPKSSAAAYT RPVYADTALY KEKEIYVKTP GHSLVGMLTE PKKGSGYPVV VLVHGSGPQD
MDETMGPNKP LKDLALGLAS KGIASIRYVK RTKVYPMDFV GANTVKEEVL DDALAAIALA
RTLPEVNKKQ LYLFGHSLGG MLAPRIALLA PDLNGILLAA APARSLTDII VEQNRYFFEL
AKDTTAAGKL MLDSVNKKLD VTRITKLGTI KADSALFGLP AAYWIDLNNY KQVETAKKLK
QRIFVAQGGN DFQVSVTDYN LWSAALGKKK NATLKLYPDL NHLLSSQTEK GTLQQYDGPA
NVSSVLIDDI VAWIKAGT