Gene Phep_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3498 
Symbol 
ID8254618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4166402 
End bp4167067 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID644937148 
Productprotein of unknown function DUF306 Meta and HslJ 
Protein accessionYP_003093751 
Protein GI255533379 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC TGCTGCTGGT TTTTGGTCTG TCGGCAGCCA GTAAAGCCGA TGTAATTACC 
TTGGTGGTAA AAGAGGACCT GGCCAGTTGT ACCGGGGTAG CGCCGATGAA CTGTATGCAG
GTGAAATATA AAAACAGCAA AAACTGGGAA TTGTTTTACA GCCAGATTGC AGGTTTTACC
TATAAACCGG GCTACCGGTA TGTATTGCTG GTAAACAGGA CCAAAAGGAA AAATGTGCCA
GCCGATGCTT CTGCTTATGA ATACAAGCTT AAAAAGGTAT TAAAAAAGAT AAAAATGAAA
ATTCCTGCTT CTGCCAATAC CGCCTGGGAT TTTGTACTGA AACATAAATG GAAACTGATT
CAGATGAATG GGGTAACGCA AAAAGACTCC CCGGTGTATA TGACATTTGA CGGGGTGCAG
AAACGGGTTA GTGGTAAATC AGGCTGTAAT ACTTTTTTTG GTGCTTATGA AAAAAGCGAT
GGTACGCTGA GCTTTCATCA AATGGCCGGA ACCATGATGG CCTGCAGCGA AGAACTGAAT
AAACTGGAAC ATCAGTTTCT GACACTGATC GGTGACCAGA CCTTTAAATA TGATGTTGCA
GAGCAGACCC TGAATTTATA CCAGAACAAC AAACTGGTAC TGATGTTTGG GATGGCGCCT
TTGTGA
 
Protein sequence
MLTLLLVFGL SAASKADVIT LVVKEDLASC TGVAPMNCMQ VKYKNSKNWE LFYSQIAGFT 
YKPGYRYVLL VNRTKRKNVP ADASAYEYKL KKVLKKIKMK IPASANTAWD FVLKHKWKLI
QMNGVTQKDS PVYMTFDGVQ KRVSGKSGCN TFFGAYEKSD GTLSFHQMAG TMMACSEELN
KLEHQFLTLI GDQTFKYDVA EQTLNLYQNN KLVLMFGMAP L