| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3496 |
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| Symbol | |
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| ID | 8254616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4161377 |
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| End bp | 4162936 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937146 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093749 |
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| Protein GI | 255533377 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000423782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TATATATCAT AATCGCTATA CTTGCTGTTA CAGCTACCGC CTGTAAACAA
AGCCTGTTAG ACCTGGCTCC GGAAGACCAG TATACCTCTG CTACATTTTT TAAAACTGAA
GCGCAGTTCA GACAAGCCGT TGCCGGGGCT TATGTACCGC TGCGTGATGT GATGACCAAC
GACTTCCATT CCGCAGAGAT GCGCTCCGAT AATACCCATT ACCAGCCTTT TGCAACCAAC
CGTGGGGCAG CTTATGTAAA CCGTGAAAAT ATTGACGATT TTGAAAACCT GCCCGGCAAT
ACTTATGTGT TGGCTTTATG GGAACACTGT TACAGGGTAA TTTCGAGGGC CAATATTGTG
ATCGACCGTT TGGCGGGTTT TGAAATGGCT GAAGCGGCTA AGAATAGTAT TGATGGGCAG
GCGAAGTTTT TACGTGCATG GGGTTATTTT AAGCTGGTAA GGCAGTTTGG TGGAGTTCCA
TTATACCTGA AAGAACTAAA GACTGCTGAT GATGCTTTTG TAAGCCGTTC TACAGAGGCT
GAAGTGTATG CGCAGATCAT TGCTGATGCA TCTGATGCGA TAAAGGAACT TCCGAACCCA
ACATTTGCCA GCAATAAACA AGCTGGTGAG GCCACCAAAG GTGCTGCGAC TGTATTGCTG
GCCGATGTAT ATGTGACCTT AAAAAGATGG AAAGATGCAG AAGACTTGTT GGTTACATTA
CAGCCGATGG GCTATGCGCT GGAGGTTAAT TATGCCGATG CGTTTTTACC ATCAAAAAAG
AACGGCAGGG AATCTATTTT TGAGGTTCAA TACTTAGAAG GTACAGCTGC CGGAACTGCA
CCTAATGCTA TACCTTTTAT GTTTTTACCA AGAACTACCT CTACTGCCGT GATTACCGGT
ACCGCTTTTC CGTCGAACAA TAAGACTGAT GGGGGTTGGA ATACCCCTAC GCCAGACCTG
ATCAGCGCTT ATGAGCCGGG CGACAAGCGC CTGGATGCTT CAATCGGGAT CATTGAAGGC
GCATATAATG GAAGTGATGA ATTTGTGTAT GCGAGTAAAA AAGACATCAC TACAGCTACC
CCTCCGGCAG CAGGCAAAAT AAACCTGCCT TACGTTAAGA AATTTATCCA TCCTCCTTTT
TTGGCAGCGC TGAATTCCAA TGACAACTGG CCAATTTACC GCTATGCGGA AGCTTTATTA
TTGCTGGCAG AAGCCCGTAA TGAGCAAAAC AAAGCTACGG CACTGGGACC TTTGAACGAA
GTAAGGACCA GGGCTTTTGG GGCTGGTTTA GGTCAGATCT CGACTACCGA CCAGACCGCT
CTGCGCGCCA TTATTTTAAA AGAACGTCGT ACCGAACTTG CTTTTGAAAA TAAAAGATGG
CATGATCTGG TAAGATCGGG AAATGCAGTA CAGATCATGA ATGCACATGG AATAGCCATA
AAGGCTGCGT TTCCATGGCA TACGGCAAGC AGTTATAATG TTACTGCAAA TAAATTATTG
TTCCCGATCC CATCATCGGA AAGAGAATTT AACCCTGCCT TAACACAGAA TCCTTTGTAA
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| Protein sequence | MKKIYIIIAI LAVTATACKQ SLLDLAPEDQ YTSATFFKTE AQFRQAVAGA YVPLRDVMTN
DFHSAEMRSD NTHYQPFATN RGAAYVNREN IDDFENLPGN TYVLALWEHC YRVISRANIV
IDRLAGFEMA EAAKNSIDGQ AKFLRAWGYF KLVRQFGGVP LYLKELKTAD DAFVSRSTEA
EVYAQIIADA SDAIKELPNP TFASNKQAGE ATKGAATVLL ADVYVTLKRW KDAEDLLVTL
QPMGYALEVN YADAFLPSKK NGRESIFEVQ YLEGTAAGTA PNAIPFMFLP RTTSTAVITG
TAFPSNNKTD GGWNTPTPDL ISAYEPGDKR LDASIGIIEG AYNGSDEFVY ASKKDITTAT
PPAAGKINLP YVKKFIHPPF LAALNSNDNW PIYRYAEALL LLAEARNEQN KATALGPLNE
VRTRAFGAGL GQISTTDQTA LRAIILKERR TELAFENKRW HDLVRSGNAV QIMNAHGIAI
KAAFPWHTAS SYNVTANKLL FPIPSSEREF NPALTQNPL
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