| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3484 |
|---|
| Symbol | |
|---|
| ID | 8254604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4145466 |
|---|
| End bp | 4146200 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644937135 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_003093738 |
|---|
| Protein GI | 255533366 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATTT TATTATTTTT TCTCTTACAC TGGTTTCTTT CCCTCTTTTC CCAAACCTTT
TTTCTGCATC GGTATGCTTC GCATAAGATG TTTAAAATGA ATACTTTTTG GGAGAAGTTT
TTTTATATCA TCACTTTTTT ATCACAGGGC TCTTCTTTTT TGAATCCACG TGCTTATGCC
ATTCTACACC GGATGCATCA CGCGTTCAGT GATACAGAAA AAGACCCTCA CTCCCCTCAT
TTTGTAAAAG ATGTTTGGGG AATGATGATT CAGACCAAGA ACATTTACCT CAATTATTCG
AAGTACAATG TGGAGCCTGA AGAACAGTTC AGGGATAAAT ATCCATCCTG GCCATTGATT
GATAAGATAG GTGATTCCTG GATTACAAGG ATCATTTTTA TCAGTTTTTA TATATGGTTC
TATGTTGTTT TTGCTACTTC ATGGTGGATG TTTTTACTGC TTCCTATCCA TTTTTTAATG
GGCCCGATAC ATGGTGCTAT TGTAAACTGG TGCGGACATA AATATGGTTA TTCCAATCAT
GACAATGATG ATCATAGTAA AAATTCACTG CCATTTGACT TTTTGATGCT TGGAGAGTTG
TTTCAGAACA ATCACCATAA AAAACCAAAC AGCCCTAATT TTGCTTCACG CTGGTTTGAA
TTTGACCCTA CTTATCCTGT TATGAAACTG ATGCACTGGA TGCGGATCAT AAAAATCAGA
AAAACAGACC ATTAG
|
|---|
| Protein sequence | MIILLFFLLH WFLSLFSQTF FLHRYASHKM FKMNTFWEKF FYIITFLSQG SSFLNPRAYA
ILHRMHHAFS DTEKDPHSPH FVKDVWGMMI QTKNIYLNYS KYNVEPEEQF RDKYPSWPLI
DKIGDSWITR IIFISFYIWF YVVFATSWWM FLLLPIHFLM GPIHGAIVNW CGHKYGYSNH
DNDDHSKNSL PFDFLMLGEL FQNNHHKKPN SPNFASRWFE FDPTYPVMKL MHWMRIIKIR
KTDH
|
|---|
| |