Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3483 |
Symbol | |
ID | 8254603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4144978 |
End bp | 4145400 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937134 |
Product | SH3 type 3 domain protein |
Protein accession | YP_003093737 |
Protein GI | 255533365 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3103] SH3 domain protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAC AAGATAAATA TAAAGAACTG ATAGACACCG CCACAACTGC CGGTGTCAGC AACTTAAATG TACGTGAACA GGATGGGGTA CTCTATATTG ATGGAGCAAC CAGCGGTACT GTAAAACAAC AGCTATGGGA TACTTATGAA CGCCTGGATC CAAATTATGC ATCTGGCGAC CTGGTTATGA ACATCAACAG CGTTGCCGGG GTAACAGAAG GTAGCAAATT AAAGGTAACC ACCAACAGCT CTAATTTAAA CATCCGCAAA GGACCAAGTA CAAACGATGA TATTGTTGGG AAGGCAGCCA GAAATGAAGT TGTAACACTT GTAAGTAAGG CTAACGACCA ATGGTGGCAA ATTAAAACCG ACCAGGGCGA AGAAGGCTAT TCCTATACAC AGTATTTAAC TCCGTTGGGA TAG
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Protein sequence | MALQDKYKEL IDTATTAGVS NLNVREQDGV LYIDGATSGT VKQQLWDTYE RLDPNYASGD LVMNINSVAG VTEGSKLKVT TNSSNLNIRK GPSTNDDIVG KAARNEVVTL VSKANDQWWQ IKTDQGEEGY SYTQYLTPLG
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