Gene Phep_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3483 
Symbol 
ID8254603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4144978 
End bp4145400 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content43% 
IMG OID644937134 
ProductSH3 type 3 domain protein 
Protein accessionYP_003093737 
Protein GI255533365 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAC AAGATAAATA TAAAGAACTG ATAGACACCG CCACAACTGC CGGTGTCAGC 
AACTTAAATG TACGTGAACA GGATGGGGTA CTCTATATTG ATGGAGCAAC CAGCGGTACT
GTAAAACAAC AGCTATGGGA TACTTATGAA CGCCTGGATC CAAATTATGC ATCTGGCGAC
CTGGTTATGA ACATCAACAG CGTTGCCGGG GTAACAGAAG GTAGCAAATT AAAGGTAACC
ACCAACAGCT CTAATTTAAA CATCCGCAAA GGACCAAGTA CAAACGATGA TATTGTTGGG
AAGGCAGCCA GAAATGAAGT TGTAACACTT GTAAGTAAGG CTAACGACCA ATGGTGGCAA
ATTAAAACCG ACCAGGGCGA AGAAGGCTAT TCCTATACAC AGTATTTAAC TCCGTTGGGA
TAG
 
Protein sequence
MALQDKYKEL IDTATTAGVS NLNVREQDGV LYIDGATSGT VKQQLWDTYE RLDPNYASGD 
LVMNINSVAG VTEGSKLKVT TNSSNLNIRK GPSTNDDIVG KAARNEVVTL VSKANDQWWQ
IKTDQGEEGY SYTQYLTPLG