Gene Phep_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3468 
Symbol 
ID8254588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4119740 
End bp4120327 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content39% 
IMG OID644937120 
Producthypothetical protein 
Protein accessionYP_003093723 
Protein GI255533351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0330591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACT TCCCACTTTA TTTTCAATTA GGCTGGCGAC ACATTTTAGA CTGGCAGGGA 
TATGATCACA TTTTATTTGT GATGGTGCTG TGCGGGACCT ATATGCTAAC CGACTGGAAA
AAAGTACTAA TCCTGATAAC AGCTTTTACC ATTGGCCATA GCATAACCCT GGCCTTAAGT
GTATTCAAAA TCATAACTGT AAATACGCCT TTAATCGAAT TTTTAATTCC CGTTACCATA
ATGGTTACCG CTGCAGCCAA CATACTGGGC AAAAGGCAAA AACCCAAAGG TCAGAAATTC
AAGTATACCA TGACCCTTTT CTTTGGCCTG ATTCATGGCT TAGGCTTCTC TAATTACTTG
AAAAGCTTGT TGGGTAAAAG CAGCAGCATT ACCGCCGAAC TATTTGCTTT TAATATCGGA
CTGGAATTTG GCCAGATACT GATCGTTATT GCAACATTGA TCTTATCATT TATCCTGATC
TGGATGGTAA AAATAAAACG ATGGGATTGG AATTTCTTTC TTTCATCTGC TATATTTGGA
ATATCATTTG TAATGGCGGC AGAACGTTTC CCGGCATTAT TAGGATAA
 
Protein sequence
MQDFPLYFQL GWRHILDWQG YDHILFVMVL CGTYMLTDWK KVLILITAFT IGHSITLALS 
VFKIITVNTP LIEFLIPVTI MVTAAANILG KRQKPKGQKF KYTMTLFFGL IHGLGFSNYL
KSLLGKSSSI TAELFAFNIG LEFGQILIVI ATLILSFILI WMVKIKRWDW NFFLSSAIFG
ISFVMAAERF PALLG