| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3460 |
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| Symbol | |
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| ID | 8254580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4112572 |
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| End bp | 4113261 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937112 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003093715 |
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| Protein GI | 255533343 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0481676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGCAA TCATAACCGG AGCCACCAGG GGTATTGGAA AAGCCATTGC GCTTAAACTG
GCAGAACATG GATATAACCT TGCCGTATGT TCAAGAAACA GCCAGGAGCT GGAAAAATTT
GCTGAAGAGC TGAAACATAC AGGGGCGCGC ATCCTCACCG TTAAAGCAGA TTGCAGTGTT
AAAGCTGATG TATATGCCTT TTGCGATGCT GTGCGCGAAC AATTTGGTAC TGTGGATGTT
TTAGTAAACA ATGCAGGGAC ATATTTACCT GGGCTTTTGC TGGATGAAGC CGATGACAGG
CTGGAAATAC AGTTAAATTT AAACCTGAAT GCTGCTTATT ATTTGTCCAA ATACTTTGGT
AAAATGATGC GGGAACGAGC TTCAGGGCAT ATCTTTAACA TCTGCTCTAT TGCCTCAAAA
GCTGTTGTAG AAAATGGGGG CAGTTATTCT GTAACTAAAT CGGCCTTGCT TAGTCTTAAT
GATGTATTGA GAGAGGAATT ATCAAAACAC AACGTTAAAG TGACAGCGAT ATTACCCGGT
TCTACATTAA CTTCATCCTG GGAGGGAACA AAAATCCCGG CTGAACGTTT TGTACTACCA
GAAGACATTG CCAGTAGCTT ATACACTGTT TTAAACTTAA GTAAAGGTGT AAATGTTGAT
GAGATCGTTT TGAAGCCGGT ACAGTTTTAA
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| Protein sequence | MNAIITGATR GIGKAIALKL AEHGYNLAVC SRNSQELEKF AEELKHTGAR ILTVKADCSV
KADVYAFCDA VREQFGTVDV LVNNAGTYLP GLLLDEADDR LEIQLNLNLN AAYYLSKYFG
KMMRERASGH IFNICSIASK AVVENGGSYS VTKSALLSLN DVLREELSKH NVKVTAILPG
STLTSSWEGT KIPAERFVLP EDIASSLYTV LNLSKGVNVD EIVLKPVQF
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