| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3459 |
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| Symbol | |
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| ID | 8254579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4111815 |
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| End bp | 4112549 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937111 |
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| Product | PspC domain protein |
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| Protein accession | YP_003093714 |
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| Protein GI | 255533342 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0516361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAGA GATTATTTAG AAATGAACAC GACAAGGTAA TTGCAGGCGT ATCATCTGGT
GTTGCCGAGT ATATGGAGGT GGATGTGACC ATTATCAGAT TACTGTTTGT GCTTTCGACT
ATCTTCTTAG TGGGTACGGG AATTTTGGTT TATGTGATCA TGTGGATCGT TGTGCCGGTA
AATAATGATC CGGCAGCTCG CTTCTCAAAA TTTAATGAGT TTTTTAAGGG GCAGCAAAAC
CCATTTCAGG CATCAAATCC GTTTGAGCCG CAAAAGAAAA CAACAGAAAA TACCGGGCCC
TTTCAGAACC GGACTTCTTC AGGTATAAAT GATACAGGTG TAGGTAATGA AAGTTTTGAG
TCATGGAAAA AATCTGGTGA TTTTAAACCT TACAAGAAAA ATAACAATGA AACCGGACGT
ACCGTTGCAG GTTTGTTTTT GCTGGTTATA GGTGTATACT TTTTTATGGA TGAGTTTGAC
TTGATCCCTT TTCATTTTCA GCTTACTAAG CTCTGGCCCC TGGTATTTGT AGCGATAGGT
GCAAGTTTTA TCATCAGGGC CAAAAATAAA AATGCCTGGG AAAACTGGAA AGAGCAAAAT
ATGCAGCCCC AGGAAAATTC AGGAAACACA GCGGATGCGC CCGGTGCAAA TGTAAATCCA
GTACAACCTG AAGACCCAGA TGCATCCGAA GGCAACACCG GAAGTAGTAT TGATTTTACA
AAAAAGGAAA TATAG
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| Protein sequence | MEKRLFRNEH DKVIAGVSSG VAEYMEVDVT IIRLLFVLST IFLVGTGILV YVIMWIVVPV
NNDPAARFSK FNEFFKGQQN PFQASNPFEP QKKTTENTGP FQNRTSSGIN DTGVGNESFE
SWKKSGDFKP YKKNNNETGR TVAGLFLLVI GVYFFMDEFD LIPFHFQLTK LWPLVFVAIG
ASFIIRAKNK NAWENWKEQN MQPQENSGNT ADAPGANVNP VQPEDPDASE GNTGSSIDFT
KKEI
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