Gene Phep_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3458 
Symbol 
ID8254578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4110877 
End bp4111812 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content42% 
IMG OID644937110 
Producthypothetical protein 
Protein accessionYP_003093713 
Protein GI255533341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0854516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG ACAGAATAAT GTGGGGTATC ATTCTGCTTT TTATTGGTGG AGTGCTTCTT 
TTGGAAAATT TCGGGATAAT TAACTTTTAC TGGTGGAGTG TGTGGCGTTT CTGGCCTATA
TTTCTTATCA TCGCTGGTGT AAACATCCTT TTTAACAGAA ATAAATCACA GATCGGGAGT
ATTGTATCTA TCATTGTTTT GCTGATTACC CTAGTCCTGC TTTTTTTTAA GGGTCAGGAA
GTACCTGCCC ATAAAAAACG TGTATCGACA GAACAGCGTA TAGACGGTGG TGATGGCGAT
ATGGAAGATG TTGTGGAGCA GACCTTCAGT CAGCCCTACA CCGATTCTGT ACCTGCCAGA
ACCGTTCTGA ACATATCAGG TGGCGGGACC TCTTTCGATC TAAAAGGCCA TACAGATAGT
CTGATTAGTG CTACTGTTCA GAGAAGAGGT GGGGCGTTCT CTTTAAAAAA TGAATTTGCA
GATAGTGTGC GTACTTTATC CTTTAAGATG AAGGGCAACA GCAGCTGGAA TGTAGGTGAT
GGAGGTAACA ATGTAGATTT AATGTTAAAT ACCCTGCCGG TTTGGGAAAT TCATGTAAAT
ATGGGAGCCG GAGAGGTTGA TTTCGACCTC TCATCTTATA AAGTACGGGA ATTTAGTTTT
GATGGTGGTG CCGCTGCGCT GGATGTGAAA CTCGGAAATA CTTTACCCAT TACCGATGTG
AAAGTGAAAA CTGGGATTGC CGATGTGAAA ATAAACATCC CTATGGCATC CGGTTGCAGG
ATAAAAGCGA AGACAGGACT TTCTTCCAGG GCGTTTACCG GCTTTACCAA AAAAGCTGAC
GGTACTTTTG AAACCTCGAA TTATAGCGCT TCGACTAATA AAATATTTAT TAATCTTGAC
GGTGGATTGA GTAGCTTTGA GGTGAAAAGA TATTAA
 
Protein sequence
MKLDRIMWGI ILLFIGGVLL LENFGIINFY WWSVWRFWPI FLIIAGVNIL FNRNKSQIGS 
IVSIIVLLIT LVLLFFKGQE VPAHKKRVST EQRIDGGDGD MEDVVEQTFS QPYTDSVPAR
TVLNISGGGT SFDLKGHTDS LISATVQRRG GAFSLKNEFA DSVRTLSFKM KGNSSWNVGD
GGNNVDLMLN TLPVWEIHVN MGAGEVDFDL SSYKVREFSF DGGAAALDVK LGNTLPITDV
KVKTGIADVK INIPMASGCR IKAKTGLSSR AFTGFTKKAD GTFETSNYSA STNKIFINLD
GGLSSFEVKR Y