Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3458 |
Symbol | |
ID | 8254578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4110877 |
End bp | 4111812 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937110 |
Product | hypothetical protein |
Protein accession | YP_003093713 |
Protein GI | 255533341 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0854516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTGG ACAGAATAAT GTGGGGTATC ATTCTGCTTT TTATTGGTGG AGTGCTTCTT TTGGAAAATT TCGGGATAAT TAACTTTTAC TGGTGGAGTG TGTGGCGTTT CTGGCCTATA TTTCTTATCA TCGCTGGTGT AAACATCCTT TTTAACAGAA ATAAATCACA GATCGGGAGT ATTGTATCTA TCATTGTTTT GCTGATTACC CTAGTCCTGC TTTTTTTTAA GGGTCAGGAA GTACCTGCCC ATAAAAAACG TGTATCGACA GAACAGCGTA TAGACGGTGG TGATGGCGAT ATGGAAGATG TTGTGGAGCA GACCTTCAGT CAGCCCTACA CCGATTCTGT ACCTGCCAGA ACCGTTCTGA ACATATCAGG TGGCGGGACC TCTTTCGATC TAAAAGGCCA TACAGATAGT CTGATTAGTG CTACTGTTCA GAGAAGAGGT GGGGCGTTCT CTTTAAAAAA TGAATTTGCA GATAGTGTGC GTACTTTATC CTTTAAGATG AAGGGCAACA GCAGCTGGAA TGTAGGTGAT GGAGGTAACA ATGTAGATTT AATGTTAAAT ACCCTGCCGG TTTGGGAAAT TCATGTAAAT ATGGGAGCCG GAGAGGTTGA TTTCGACCTC TCATCTTATA AAGTACGGGA ATTTAGTTTT GATGGTGGTG CCGCTGCGCT GGATGTGAAA CTCGGAAATA CTTTACCCAT TACCGATGTG AAAGTGAAAA CTGGGATTGC CGATGTGAAA ATAAACATCC CTATGGCATC CGGTTGCAGG ATAAAAGCGA AGACAGGACT TTCTTCCAGG GCGTTTACCG GCTTTACCAA AAAAGCTGAC GGTACTTTTG AAACCTCGAA TTATAGCGCT TCGACTAATA AAATATTTAT TAATCTTGAC GGTGGATTGA GTAGCTTTGA GGTGAAAAGA TATTAA
|
Protein sequence | MKLDRIMWGI ILLFIGGVLL LENFGIINFY WWSVWRFWPI FLIIAGVNIL FNRNKSQIGS IVSIIVLLIT LVLLFFKGQE VPAHKKRVST EQRIDGGDGD MEDVVEQTFS QPYTDSVPAR TVLNISGGGT SFDLKGHTDS LISATVQRRG GAFSLKNEFA DSVRTLSFKM KGNSSWNVGD GGNNVDLMLN TLPVWEIHVN MGAGEVDFDL SSYKVREFSF DGGAAALDVK LGNTLPITDV KVKTGIADVK INIPMASGCR IKAKTGLSSR AFTGFTKKAD GTFETSNYSA STNKIFINLD GGLSSFEVKR Y
|
| |