| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3453 |
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| Symbol | |
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| ID | 8254573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4105895 |
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| End bp | 4107157 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937105 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003093708 |
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| Protein GI | 255533336 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.403237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0945543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACAAC CTCAAAAAAA TATAGCCGAG CCTTTTAGTT CTTACCAACT GCTGGTTATT
GCCTTGCTGG CTTTACTGCA GTTTACAATT GTACTGGACT TTATGGTACT TGCGCCACTT
GGCGACTTTT TAATGAAATC GTTATCCATA AGCCCTAAAG GTTTTGGATT GGTCGTCTCT
TCCTATGCTT TTAGTGCAGG TGCTTCAGGA ATTATGGCTG CCGGTTTTGC CGATAAATTT
GACCGTAAAA AGTTGCTGCT GTTTTTTTAC AGCGGTTTTA TTATAGGAAC CTTGTGTTGT
GCACTTGCCA CCAATTACGA GATGCTACTT GGTGCAAGGA TTGTAACCGG TTTATTTGGT
GGTGTAATCG GCGCCATCTC TATGACAATC ATTACAGATA TTTTTGCCGT TCACCAACGT
GGCAGAGTGA TGGGGGTTGT GCAGATGGGT TTCGCTGCAA GCCAGGTACT GGGTATACCC
ATTGGTTTGT ATTTTGCCAA TATATGGGGC TGGCATTCTT CATTTCTGAT GATTGTGATA
TTGGCAATAA TGATCGCAAT TGCAATTCTG ATCAAGATAA AACCAATTGA CAAGCATCTG
GCCATACAAT CAGACAAAAG CGCCTTCCTG CATTTGTGGC ATGCGGTTTC TAACCGTTCC
TATCAGACAG GATTTATTGC AACTGCATTT ATGGGTGTTG GTGGTTTTAT GTTAATGCCA
TTTGGAAGTG CTTATCTGAT CAATAACATC AACATTACTG AAGCGCAACT GCCATTGGTA
TTTATGTTTA CCGGCCTGGC TGCTGTTGTT GTAATGCCAT TAATTGGAAA ATTAAGTGAT
AAAGTAGACA AGTTTATGGT GTTTACTGGT GGGTCATTGC TTGCAGTGGT AATGATTCTG
GTATACACTA ACCTTAGTCC GGTTCCATTA TGGCAGGTTA TCGTGATCAA TATGGTCTTA
TTTATGGGGG TGATGAGCAG GATGATTCCT GCAACTACAC TTACGATGAG CATCCCTGAC
CTAAATGACA GGGGGGCTTT TATGAGTGTC AATGCTTCTA TACAACAAAT GGCCGGTGGT
ATTGCTGCGT TATGTGCTGG TTTGATCGTT ACACAGAGAA CAAAGAGTAG TCCACTGGAG
CATTATGATA CTTTAGGTAT AGTGGTATCG GCACTTATAC TTTTATGCAT ATTTTTGGTT
TACCGTGTAA GTGTAATGGT GAAAAAGAAA GACGCTGTAT TGAAAATCCC AGCTAAGCAC
TGA
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| Protein sequence | MQQPQKNIAE PFSSYQLLVI ALLALLQFTI VLDFMVLAPL GDFLMKSLSI SPKGFGLVVS
SYAFSAGASG IMAAGFADKF DRKKLLLFFY SGFIIGTLCC ALATNYEMLL GARIVTGLFG
GVIGAISMTI ITDIFAVHQR GRVMGVVQMG FAASQVLGIP IGLYFANIWG WHSSFLMIVI
LAIMIAIAIL IKIKPIDKHL AIQSDKSAFL HLWHAVSNRS YQTGFIATAF MGVGGFMLMP
FGSAYLINNI NITEAQLPLV FMFTGLAAVV VMPLIGKLSD KVDKFMVFTG GSLLAVVMIL
VYTNLSPVPL WQVIVINMVL FMGVMSRMIP ATTLTMSIPD LNDRGAFMSV NASIQQMAGG
IAALCAGLIV TQRTKSSPLE HYDTLGIVVS ALILLCIFLV YRVSVMVKKK DAVLKIPAKH
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