Gene Phep_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3447 
Symbol 
ID8254567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4098809 
End bp4099645 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content43% 
IMG OID644937099 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003093702 
Protein GI255533330 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.733852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGT ACGCTTTAGT GCAATTGATC TCCTGGGGAA CGCTGGTTGT TCGGCTGGAA 
CCTGCCAGAA TGGCAATGGT GATGGGCGAA GGGTCGGTGT TTTTATTTTT ACTATGTATA
GGGGCTTATT TTTTACACCA GTCTATCAAA AAAGAAGAGC GTCTGCGTGA ACAGCAGCAA
AATTTTTTGC TCTCTGTAAC GCATGAGTTA AAATCACCTT TGGCTGCTAT AAAATTATCA
ATTCAAACCA TCATCAAACG TGACCTTGAT AAGGCGCGGC AGACGTCCTT ACTGAGCAAT
TCTTTAAAAG ATATTGAACG TTTGGACGAC CTGGTAGAAA ACATGTTATT GGCTACAAAG
ATAGAAAACC GCTCTTATTC CTTCCCTAAA GAGGAATTTG ACTTCTCGGA GTTGGTTACC
AAAATCACTG ACAGGCTGCA GGTCCATTCC TGCGGATGTG AACAGTTGAT TACACCGGTT
ATCAAACCAG GAATAAAGGT GATGGGCGAT CAGTTTGCAC TCTCGTCGGT AGTGACCAAC
CTGGTCGAAA ATGCAGTAAA GTATTCGGGT CCCTGCGCTG ATGTGGCGGT TGAACTGACA
GAAAAAGACG GCCATCCTTT TTTAAGGGTA GCTGACAAAG GGCCTGGTAT TCCCGACAGT
GAAAAGATGC TGATTTTCGA TAAATTTTAC CGGGTTGGTG ATGAGAATGT CAGAAAATCA
AAAGGAACGG GTTTAGGCCT GTTTATTGTT AAGGAAGTAT TACAAAGCCA CGACGCTGAT
ATCAGCGTTA GAGATAACGT ACCGCAAGGT GCTATTTTTG AAATAACATT TAGTTGA
 
Protein sequence
MLLYALVQLI SWGTLVVRLE PARMAMVMGE GSVFLFLLCI GAYFLHQSIK KEERLREQQQ 
NFLLSVTHEL KSPLAAIKLS IQTIIKRDLD KARQTSLLSN SLKDIERLDD LVENMLLATK
IENRSYSFPK EEFDFSELVT KITDRLQVHS CGCEQLITPV IKPGIKVMGD QFALSSVVTN
LVENAVKYSG PCADVAVELT EKDGHPFLRV ADKGPGIPDS EKMLIFDKFY RVGDENVRKS
KGTGLGLFIV KEVLQSHDAD ISVRDNVPQG AIFEITFS