Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3447 |
Symbol | |
ID | 8254567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4098809 |
End bp | 4099645 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937099 |
Product | ATP-binding region ATPase domain protein |
Protein accession | YP_003093702 |
Protein GI | 255533330 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.733852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTGT ACGCTTTAGT GCAATTGATC TCCTGGGGAA CGCTGGTTGT TCGGCTGGAA CCTGCCAGAA TGGCAATGGT GATGGGCGAA GGGTCGGTGT TTTTATTTTT ACTATGTATA GGGGCTTATT TTTTACACCA GTCTATCAAA AAAGAAGAGC GTCTGCGTGA ACAGCAGCAA AATTTTTTGC TCTCTGTAAC GCATGAGTTA AAATCACCTT TGGCTGCTAT AAAATTATCA ATTCAAACCA TCATCAAACG TGACCTTGAT AAGGCGCGGC AGACGTCCTT ACTGAGCAAT TCTTTAAAAG ATATTGAACG TTTGGACGAC CTGGTAGAAA ACATGTTATT GGCTACAAAG ATAGAAAACC GCTCTTATTC CTTCCCTAAA GAGGAATTTG ACTTCTCGGA GTTGGTTACC AAAATCACTG ACAGGCTGCA GGTCCATTCC TGCGGATGTG AACAGTTGAT TACACCGGTT ATCAAACCAG GAATAAAGGT GATGGGCGAT CAGTTTGCAC TCTCGTCGGT AGTGACCAAC CTGGTCGAAA ATGCAGTAAA GTATTCGGGT CCCTGCGCTG ATGTGGCGGT TGAACTGACA GAAAAAGACG GCCATCCTTT TTTAAGGGTA GCTGACAAAG GGCCTGGTAT TCCCGACAGT GAAAAGATGC TGATTTTCGA TAAATTTTAC CGGGTTGGTG ATGAGAATGT CAGAAAATCA AAAGGAACGG GTTTAGGCCT GTTTATTGTT AAGGAAGTAT TACAAAGCCA CGACGCTGAT ATCAGCGTTA GAGATAACGT ACCGCAAGGT GCTATTTTTG AAATAACATT TAGTTGA
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Protein sequence | MLLYALVQLI SWGTLVVRLE PARMAMVMGE GSVFLFLLCI GAYFLHQSIK KEERLREQQQ NFLLSVTHEL KSPLAAIKLS IQTIIKRDLD KARQTSLLSN SLKDIERLDD LVENMLLATK IENRSYSFPK EEFDFSELVT KITDRLQVHS CGCEQLITPV IKPGIKVMGD QFALSSVVTN LVENAVKYSG PCADVAVELT EKDGHPFLRV ADKGPGIPDS EKMLIFDKFY RVGDENVRKS KGTGLGLFIV KEVLQSHDAD ISVRDNVPQG AIFEITFS
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