| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3444 |
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| Symbol | |
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| ID | 8254564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4096539 |
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| End bp | 4097561 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937096 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003093699 |
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| Protein GI | 255533327 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGT TATTTTTAGA TGCAGCATTT TCAAAGCAAA CAGAACGCCC ACCAGTGTGG
ATGATGCGCC AGGCTGGCCG TTTTATGCCG GAGTATTGGG AAATTAAAAA CAAATACTCT
TTTCTGGAGA TGTGCAAAAC ACCGGAAATT GCTGCTGATG TAACGATGCT TCCGGTTGAT
TTGCTTGGGA TTGATGCCGC TATTTTGTTT TCGGACATCC TGGTAACAGG TGAAGCTATG
GGTGGAGACC TGAGCTTTAC GCAAGGTATA GGCCCTAAAT TTGCTAACCC GGTGCGTACA
CTTAAAGATG TGGAGGCTTT AGAAGTAGAT GTGCTCGACA GGCTGCAATA TGTGGCTGAT
GCGATCAAAG TGATCCAGCA ACGTTTAAAT GGTAGTATTC CTTTAATTGG TTTCGCCGGA
GCACCATTTA CAGTAATGAG CTACCTCGTT GAAGGTGGTT CTTCCAAAGA TTTTAAGCTG
ACCAAATTGC TGATGCACAA CCAGCCGGAA GTAGCACATA AACTATTGGC TAAAATTGCT
AAGGTTACTG CCGATTACCT GAACCTGCAA ATTGCAGCAG GTGTAAATGC CATTCAGATC
TTTGACAGTT GGGCATTGGC CCTGTCATGG AACGATTATC AGGAATTTTC GCACCGCTAC
ATCCAGGAAA TTATTGCCAA CCTGAACAGA AAAGACATCC CAGTGATCTC TTTCTGCAAA
GGCAGTTCGG TATTTGCCCC GATTATGGCT GAAGCTAAAC CAGATGTGAT TTCGGTAGAC
TGGAACGCGG ATCTTTTAAA TATTAAAAAC AGTTTGCCTG CAGGTATCGC TGTACAGGGT
AACCTTGATC CGCATATTTT ATATGCGGAT AAACCTGTCA TTAAAAAAGA AATCCTCAGA
CTATTTGAGC GCATGCGCGG ACAAAACGGT TTTATTTTTA ACTTAGGTCA TGGTATTATG
CCTGATATTC CTTTCGACAA CGTAAAATAT GCAATAGAAG TAATTAAGGA GTTTAAATAC
TAA
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| Protein sequence | MNTLFLDAAF SKQTERPPVW MMRQAGRFMP EYWEIKNKYS FLEMCKTPEI AADVTMLPVD
LLGIDAAILF SDILVTGEAM GGDLSFTQGI GPKFANPVRT LKDVEALEVD VLDRLQYVAD
AIKVIQQRLN GSIPLIGFAG APFTVMSYLV EGGSSKDFKL TKLLMHNQPE VAHKLLAKIA
KVTADYLNLQ IAAGVNAIQI FDSWALALSW NDYQEFSHRY IQEIIANLNR KDIPVISFCK
GSSVFAPIMA EAKPDVISVD WNADLLNIKN SLPAGIAVQG NLDPHILYAD KPVIKKEILR
LFERMRGQNG FIFNLGHGIM PDIPFDNVKY AIEVIKEFKY
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