| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3438 |
|---|
| Symbol | |
|---|
| ID | 8254558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4090118 |
|---|
| End bp | 4091101 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644937090 |
|---|
| Product | 2,3-diketo-L-gulonate reductase |
|---|
| Protein accession | YP_003093693 |
|---|
| Protein GI | 255533321 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATAC CATTTCAGGA GCTTAAGGCC GAATTTAAAA GAGTATTGTT AAAATTATCA
TTTCCGCCGG AAACTGCCGA TAGCTGTGCC CTGGTATTTG CCGCCAACAG CAGGGATGGT
GTTTATTCTC ATGGATTAAA CAGGTTTCCT GTTTTTGTAA AGCTGGTGCA AAAAGGGCTG
ATAAAGGCAA ATGCCTTGCC TGCCTTACTG GAAAGAAATG GAGCAATAGA GCGTTGGGAC
GGGAATTTTG CACCAGGTAT GTCAAATGCC AGCCATTGCA TGGCCCGCGC TGTCGAACTG
GCAAAAATAA ATGGAATTGG TTGCGTGGCC ATCAAAAATA CCAACCATTG GATGCGTGGT
GGAACTTATG GCTGGCAGGC TGCAGATGCT GGTTGCATAG GTATATGTTT TACCAATGCT
ACCGCCAATA TGCCTGCCTG GGGTGGTAAA GATCCGGTGT TGGGCAATAA TCCCCTCGTA
ATCGCAATAC CAAGGAAAGA AGGGCATGTG GTGCTCGATA TGGCCATGTC GCAATTTTCC
TATGGTAAAA TGCAGGAATA TGAATTAAAG AACGAAGCCT TACCCTTTCC CGGAGGATAT
GATGAACAGG GAAATTTAAG TACAGATCCT GCAGTAATCC GTAAAACAAA ACTGGCCCTG
CCAATTGGTT TCTGGAAAGG TTCCGGCCTG TCTTTGGTGC TGGATTTATT GGCCGTAGCG
CTTAGTGGCG GCAATTCAAC CGGAAAAATA TCGGCTCAGG CCGATGAAAC AGGAGTGTCC
CAATGTTTTA TTGCCATCCG GCAGCCAGAC ATGCATGATG CGCTGATTGC AGAGGTGCTT
GCTTATACAA AAAATAGTGA GGCCGTTAAA GCGGGCGGAC AGGTAAGCTA TCCGGGTGAG
CGCACCTTAC AGACCCGATT GGAAAATGAA GAAAAGGGGA TACCTGTAAA TGAAGAGATC
TGGATGCAGG TAAAAAATTT TTAG
|
|---|
| Protein sequence | MRIPFQELKA EFKRVLLKLS FPPETADSCA LVFAANSRDG VYSHGLNRFP VFVKLVQKGL
IKANALPALL ERNGAIERWD GNFAPGMSNA SHCMARAVEL AKINGIGCVA IKNTNHWMRG
GTYGWQAADA GCIGICFTNA TANMPAWGGK DPVLGNNPLV IAIPRKEGHV VLDMAMSQFS
YGKMQEYELK NEALPFPGGY DEQGNLSTDP AVIRKTKLAL PIGFWKGSGL SLVLDLLAVA
LSGGNSTGKI SAQADETGVS QCFIAIRQPD MHDALIAEVL AYTKNSEAVK AGGQVSYPGE
RTLQTRLENE EKGIPVNEEI WMQVKNF
|
|---|
| |