Gene Phep_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3432 
Symbol 
ID8254552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4086541 
End bp4087329 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content42% 
IMG OID644937085 
ProductTipAS antibiotic-recognition domain protein 
Protein accessionYP_003093688 
Protein GI255533316 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.712968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA TGAAAAAGTT AAGCATCTAT TCGGTAAAAC AACTGGCAAA ATTGGCCGGT 
GTAACTGTAA AGACCCTGCA CCTTTATGAC CAGATGGGTT TACTTAAACC TGCTGAAAGA
ACTTTGACCC GGTATCGCCT TTACAAAGAA CCGGAATTGT TACGGTTGCA ACAAATCTTG
TTTTATAGGG AGCTTGACTT TTCGCTCAAA GAAATCCGCT CTATCCTGGA CAATTCAAAT
TTTGACCTGA TGCAAGCATT GGAGAGTCAT AAGGCGATGC TAAAGGCAAA AAAAGCAAGA
TTGGCAATGC TGATGAAAAC GCTGGAAAAC ACTATACATT CACTAAAACA TAAAACCATG
TTAAACCTGG AAGACCTATA TGAAGGACTA AACCGGGATG AAGCCCAAGC CTACAGAAGC
CAGGCCATCC TTAATTACGG CGAAGAAGCC GTAACCCATG CAGAAAATCA TTTGAAAAGC
TTAAACAAAG AAGAGATGCA GGTACTAGTA GCCAGGCAAA AAGAACTTGG CAAAGCCTTA
TACTTGTTGA AACATCAAGA CCCTTCCAGC CATAGCGTTC AGGAGCTGGT TGAGCAGCAC
TACCTGAATA CCAGGAAACT TTGGGGTACC CACCTTGCCG CTGATAAACA GGCCCAGACA
TACAAAGGGT TGGGAGAACT TTACCTGTCA GACGAAAGAT TTACCAGTGA GATGGGTTCA
TCAGATCCAG GTTTCAGGAC TTTTATCAGC AAAGCGATGG CATTTTATTC CGAATCGTCA
CTTAAATAG
 
Protein sequence
MNKMKKLSIY SVKQLAKLAG VTVKTLHLYD QMGLLKPAER TLTRYRLYKE PELLRLQQIL 
FYRELDFSLK EIRSILDNSN FDLMQALESH KAMLKAKKAR LAMLMKTLEN TIHSLKHKTM
LNLEDLYEGL NRDEAQAYRS QAILNYGEEA VTHAENHLKS LNKEEMQVLV ARQKELGKAL
YLLKHQDPSS HSVQELVEQH YLNTRKLWGT HLAADKQAQT YKGLGELYLS DERFTSEMGS
SDPGFRTFIS KAMAFYSESS LK