Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3432 |
Symbol | |
ID | 8254552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4086541 |
End bp | 4087329 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937085 |
Product | TipAS antibiotic-recognition domain protein |
Protein accession | YP_003093688 |
Protein GI | 255533316 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.712968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA TGAAAAAGTT AAGCATCTAT TCGGTAAAAC AACTGGCAAA ATTGGCCGGT GTAACTGTAA AGACCCTGCA CCTTTATGAC CAGATGGGTT TACTTAAACC TGCTGAAAGA ACTTTGACCC GGTATCGCCT TTACAAAGAA CCGGAATTGT TACGGTTGCA ACAAATCTTG TTTTATAGGG AGCTTGACTT TTCGCTCAAA GAAATCCGCT CTATCCTGGA CAATTCAAAT TTTGACCTGA TGCAAGCATT GGAGAGTCAT AAGGCGATGC TAAAGGCAAA AAAAGCAAGA TTGGCAATGC TGATGAAAAC GCTGGAAAAC ACTATACATT CACTAAAACA TAAAACCATG TTAAACCTGG AAGACCTATA TGAAGGACTA AACCGGGATG AAGCCCAAGC CTACAGAAGC CAGGCCATCC TTAATTACGG CGAAGAAGCC GTAACCCATG CAGAAAATCA TTTGAAAAGC TTAAACAAAG AAGAGATGCA GGTACTAGTA GCCAGGCAAA AAGAACTTGG CAAAGCCTTA TACTTGTTGA AACATCAAGA CCCTTCCAGC CATAGCGTTC AGGAGCTGGT TGAGCAGCAC TACCTGAATA CCAGGAAACT TTGGGGTACC CACCTTGCCG CTGATAAACA GGCCCAGACA TACAAAGGGT TGGGAGAACT TTACCTGTCA GACGAAAGAT TTACCAGTGA GATGGGTTCA TCAGATCCAG GTTTCAGGAC TTTTATCAGC AAAGCGATGG CATTTTATTC CGAATCGTCA CTTAAATAG
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Protein sequence | MNKMKKLSIY SVKQLAKLAG VTVKTLHLYD QMGLLKPAER TLTRYRLYKE PELLRLQQIL FYRELDFSLK EIRSILDNSN FDLMQALESH KAMLKAKKAR LAMLMKTLEN TIHSLKHKTM LNLEDLYEGL NRDEAQAYRS QAILNYGEEA VTHAENHLKS LNKEEMQVLV ARQKELGKAL YLLKHQDPSS HSVQELVEQH YLNTRKLWGT HLAADKQAQT YKGLGELYLS DERFTSEMGS SDPGFRTFIS KAMAFYSESS LK
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