| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3428 |
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| Symbol | |
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| ID | 8254548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4083076 |
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| End bp | 4084134 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937081 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003093684 |
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| Protein GI | 255533312 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA ATATTGCTCT GCTAGCAGGA GATGGAATTG GCCCGGAGGT AATTGACCAG
GCTGTTAAAG TATCAAATGC GGTAGCAAAG AAATTTAACC ACGAAATTGT ATGGACATCA
GGTATTACAG GAGCAGCGGC TATAGATGCA GTTGGCGAAC CTTATCCGGA TGCTACACAT
GAGATCTGCA TGGCTGCCGA TGCCGTATTG TTTGGTGCAA TTGGTCACCC GCGTTTTGAC
AATGACCCTA AAGCTACCGT TCGCCCCGAG CAGGGATTGC TGAAAATGCG TCAGAAACTG
GGCTTATTTG CAAACGTACG CCCAACTTTT ACTTTCCCTT CCTTAATTGA CAACTCGCCT
TTAAAAAGAG AGCGCATTGA AGGTACCGAC CTGATCATTC TGCGCGAATT AACAGGGGGT
ATCTATTTTG GCGAAAGAGG CAGAAAGGAC GATGGCAATA CCGCTTTTGA TACTTGTACC
TATACCAGGG CCGAGATTCA GCGTCTGGCA AAATTAGGTT TCGAAATGGC GATGACCCGC
AGTAAAAAAC TATGCTGCGT AGATAAAGCA AACGTTCTGG AGTCTTCACG TTTATGGAGA
GAAACGGTAC AGGATATGGA AAAAGATTAT CCTGAGGTTG AGGTAAGCTA TGAATTTGTG
GACGCCGTAG CCATGCGTTT GGTTCAATGG CCAAGCTCAT ATGATGTATT GATCACAGAA
AACCTGTTTG GCGATATTTT AACCGACGAG GCTTCTGTAA TTTCAGGTTC TATGGGACTA
ATGCCTTCGG CATCTATCGG TGTACATACT TCTTTATTTG AGCCCATCCA TGGTTCTTAC
CCTCAGGCTG CAGGTAAAGA CATTGCCAAC CCATTGGCTA CCGTACTTTC GGCTGCCATG
ATGTTTGAAG ATGCTTTTGG TTTAAAAGAA GAGGCGGAAC TGATCAGGGC CGTTGTAAAC
AAATCTTTAG CTGAAGGTAT GGTTACTGAA GACCTTTCAG GAAAAAACAA AGCTTACAAA
ACAAGTGAAG TTGGCGACTG GCTGGCTGCT AATATTTAA
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| Protein sequence | MKLNIALLAG DGIGPEVIDQ AVKVSNAVAK KFNHEIVWTS GITGAAAIDA VGEPYPDATH
EICMAADAVL FGAIGHPRFD NDPKATVRPE QGLLKMRQKL GLFANVRPTF TFPSLIDNSP
LKRERIEGTD LIILRELTGG IYFGERGRKD DGNTAFDTCT YTRAEIQRLA KLGFEMAMTR
SKKLCCVDKA NVLESSRLWR ETVQDMEKDY PEVEVSYEFV DAVAMRLVQW PSSYDVLITE
NLFGDILTDE ASVISGSMGL MPSASIGVHT SLFEPIHGSY PQAAGKDIAN PLATVLSAAM
MFEDAFGLKE EAELIRAVVN KSLAEGMVTE DLSGKNKAYK TSEVGDWLAA NI
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