| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3417 |
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| Symbol | |
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| ID | 8254537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4069775 |
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| End bp | 4070665 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937070 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_003093673 |
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| Protein GI | 255533301 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATT TCAATTCAAA TACAGTGCTT TATTTAAACG GAAAGTTTGA GAAAGCAGCT
GACACGACTG CCGATATATA CGGACAGTCA TTACATTATG GCTATGCTGT ATTTGAAGGA
ATCAGGGCAT ACAGCACCCA TAATGGCACC AGGATTTTTA AGGTAAAGGA ACATTATGAA
CGCTTAAAAC GTTCGGCAGA ACTGGTAAAC ATGCCCTTTC ACTGGAACAT AAACGATCTG
ATCAAGCAAA CTTATAAATT ACTTGAACTA AACAATTTAA AGAACGCTTA TATCAGGCCC
TTGATCTATT GTGCACCAAA TATGTCGCTT GTTGCGGGTA CAAAAACATC CATCATGATC
TGTGCCTGGG AATGGGGAGC TTACCTTGGA CACGAACAAT TAAAAGTTTG TATCTCAAGT
TATGAAAGGC CCAATCCTAA GTCAACCGCT ATTGAAGCCA AAGTAAGCGG CAATTATGTA
AACTCTATAC TGGCCACTAC CGAGGCAAAA AATAAAGGTT TTGATGAAGC TTTATTGCTG
GATATGAACC AGAACATTGC CGAAGGGCCG GGCGCAAATA TCTTTATTGA AAAGAACGGC
AGGCTGTACA CTCCGCCACC GGGACATATT TTACCAGGCA TTACCCGTGC CACCATTATT
GAGCTGTGCC AGATCCTGGA TATAGAACTT ATTGAAAAGC ATTTAACGGT TAAGGATATC
AAACATGCCG ACAGTGCCTT TTTCTGCGGT ACGGCCTCCG AAATCGCCGG GATAGCATCG
GTAGACGAGT ATACCTTTCC GGTCAAATGG GTAGATAGCC TGGGCGCTAC CCTGCAGCGC
ACTTACAAGT GCCTTGTTTT AGAGAAACAA AACTATGAAG TAATTATATA A
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| Protein sequence | MQYFNSNTVL YLNGKFEKAA DTTADIYGQS LHYGYAVFEG IRAYSTHNGT RIFKVKEHYE
RLKRSAELVN MPFHWNINDL IKQTYKLLEL NNLKNAYIRP LIYCAPNMSL VAGTKTSIMI
CAWEWGAYLG HEQLKVCISS YERPNPKSTA IEAKVSGNYV NSILATTEAK NKGFDEALLL
DMNQNIAEGP GANIFIEKNG RLYTPPPGHI LPGITRATII ELCQILDIEL IEKHLTVKDI
KHADSAFFCG TASEIAGIAS VDEYTFPVKW VDSLGATLQR TYKCLVLEKQ NYEVII
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