| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3407 |
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| Symbol | |
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| ID | 8254526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4058208 |
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| End bp | 4058957 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644937059 |
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| Product | regulatory protein DeoR |
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| Protein accession | YP_003093663 |
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| Protein GI | 255533291 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.161836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTAAAG ACGAAAGGCA CAAACTAATC ATGCGAGAGA TTAACCTTCA CAATAAGGTT
TTGTCAACTG ATCTGAGCGC ATTATTGAAT ATCTCAGATG ATACGGTTAG ACGGGACCTG
AAAGAACTTG CAGAGGGTGG AAAATTATTG AAAGTTCATG GAGGTGCCGC AAGTAAATCC
TTTGTAGCCC CCTTCAATAC GTTAAATGAA GTGTATGCAA TAAATGAAAA AAGGGCAATT
GCAGAAAAAA CATTAAAAAT TATAAAGAAT GATATGGTCA TTCTTACCGA GGGCGGCACC
ACGATACTTG AATTTGCTAA AATGATTCCT GAAAGTTTGA AGGTAACTTT TTTTACGATA
AGCCCACAAG TAGCCATCAC TTTATCTGAC CATCACAACC TGGAGGTGAT TACTATTGGC
GGCAAACTCA ACAAAAACGC AAACCTGCAT ATCGGAGCAA GTGTAATTAA CCAGCTGGTG
GATATTAAGG TAGACCTGTG TTTATTAGGC GCAAATGCAT TTTCGGCGGA AGAAGGACTT
ACAGATATGG ATTGGGATAT TGTACAGGTG AAAAAAGCGA TTATCAGAGC TTCAAAAAGA
ACCGCTGTAC TAAGCATTTC GGAGAAATTG AATACTGCAC AGCGAATTAG GATCTGCGAT
CCGAATCATA TTAATTATCT CATTACTGAA TTACCCGCCG AAAGTCCGTT GTTAAAAAAT
TACAAAAATG ATTACTTGAA CTTACTTTAA
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| Protein sequence | MRKDERHKLI MREINLHNKV LSTDLSALLN ISDDTVRRDL KELAEGGKLL KVHGGAASKS
FVAPFNTLNE VYAINEKRAI AEKTLKIIKN DMVILTEGGT TILEFAKMIP ESLKVTFFTI
SPQVAITLSD HHNLEVITIG GKLNKNANLH IGASVINQLV DIKVDLCLLG ANAFSAEEGL
TDMDWDIVQV KKAIIRASKR TAVLSISEKL NTAQRIRICD PNHINYLITE LPAESPLLKN
YKNDYLNLL
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