| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3406 |
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| Symbol | |
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| ID | 8254525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4054805 |
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| End bp | 4057825 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937058 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093662 |
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| Protein GI | 255533290 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACTG AGGCAAAAGC AGAAGACTTC TTTTACCAGG AAGCGCGCGC TAAGCTGATA
ACAGGTAAAG TAATCGATGA GAATAAACTG CCACTAATCG GTGTATCCGT TAAAATTAAA
GGCGGAACTG GTGGAGCCAT TACAAATGCA GAAGGGGATT TTACCCTGAG TGTTAAAAGT
GAAAAGGATT CCATACAGTT CTCTTATATC GGCTACAAAA CCCAGACGAT CAGTGCTGGC
GTTACCGGAT TTGTCACCAT CCAAATGACT CCAAGGTCTA AAGAAAACCT GGACGAAGTT
GCCATTGTTG GTTACGGAAC GCAGAAAAAG GTTTCTGTAA CAGGCGCGAT CAGTACCATT
TCCGTATCTG AAATGCAGAA AGTATCCACT CCCTCCTTAT CTAATGCGAT AGCAGGTAAG
CTCCCCGGTA TTATTACCAG GCAGGCTACC GGAGAGCCTG GATATGATGC GGCTGCCATC
TACATCCGCG GCCTTTCTAC GTTTGGTCAA AATGCGCCAT TGGTGCTGAT AGACGGTGTA
GAACGTGATA TGAACCAGAT CAATGCGCAA GAGATTGAAA GCTTCACTAT CCTCAAAGAT
GCCTCTGCAA CTGCAGTTTA CGGCGTAAGG GGAGCTAACG GTGTAATTTT GTTGACTACC
AAACGTGGTT CAGTGGGTAA GCCGGCTGTC ACCTTCAGGT CAGAGGCGGC AGCACTTCAT
GCCATGCGTT TACCGGAGTA CATCAATGCC GGGCAATATG CTTCGTTAAT GAATGAGGCG
CGCATCAACT CCGGAAATTC ACCAACCTGG AGTGATGAGG AAATACGGAA ATTCAAAGAT
GGATCAGATC CTTACCTGTA TCCGAATTCC AACTGGACCG ATGCCGTATT AAAAAAAGAT
ACCTGGCAAA CCATTCAAAA CCTCAGCGTA ACAGGAGGTA GTGATGTCAT TAAATACTAT
ACCAACGTAG GTTTTACTTT GCAGGACGGA ATCTATAAAC AAGACAATAA CAATCCCTAC
AATACCAACG CAAACATAAA ACGGTATAAT TTTCGCAGTA ACGTGGACAT CAACCTCTCA
AAAAGTTTGT ATATGCAATT GGGAATTGGT GGTATCATCC ACAAAGGTAA TTATCCGGGA
TGGTCTGCGC CAGATATTTT CAATGCACTA AAAGTCATTT CGCCCATCGC TTATCCGGTA
ACCAACCCAG ACGGCACGCC TGGCGGCGCA GCAACTTATT TAGGATGGAA TCCTTGGGCC
AGGGCAACCC AGTCAGGCTA TACAACTCAG GACCGCCTCA ACCTGCAAGG TACTTTCGCC
ATGAAATGGG ACTTGTCCTC TTTTACAACG AAAGGACTTT CACTCAGGGC ATTGTTTGCC
TATGATCGTT ACACGCAAAC GGATAATCCC AGAAGAAAAG CTTTTCTTGT GAAACGTTAT
CTCGGTAAAG ATCCGATAAG CGGTAAAGAC CTTTACAGCA CTCCTTTTCA GGAAGAACAA
CCGCTTGGTT ATGGTGTGGG GGGATACAGC AACCGCGCCA TATATACCGA AGCGCAGATC
AATTACGAGC GATCGTTCGG TAAACATAGC GTAACTTCCA TGCTCCTGCT AAATGAGCGT
GATTACGTCG ATCTGTCTGC CGGTACTTCT GTTGCAAACC TGCCCTATCG CAGAAGAGGC
CTTTCCGGTA GAACCACCTA TAATTATGAC AATCGTTATT TGGTAGAATT CAATTTTGGT
TATAACGGTT CAGAAAACTT CCCTGACGGT AAGAAATATG GATTTTTTCC TGCTGCTTCT
GCAGGCTGGG TAGTCTCTAA TGAAAAGTTC TGGAAAGTGA ATTTTGTAAG TAACCTGAAA
ATAAGAGCTT CAAGAGGTTT AGTAGGAAAT GACAATATTT CCCAACGTTT CTTATTCCTG
AGCACAATCC GGACCAACGG ACAGTCTTAT CTTTTCGGAG CCGATCAGCA ATTGTTTAAC
GGAATGGAAG AAGAGGCGAT TGGAAATCCG AATGTAACCT GGGAAAGGGC CACCAAAAAC
AACATTGGTA TAGATCTGGG TTTATTTAAA GACAGAATTA CCCTGCAAAT TGATGCTTTT
AATGAAGATA GAAAAGACAT CTTACTTAGA AGAGGTACAG TACCTGATTT TGCAGGTTTC
TTTCCCTGGT CTATTCCTTA TGGCAACCTC GGCCGGATCA AAAATAAGGG TATTGATGGT
TTATTGGAAA TCAAAAATAC AACCAGCAAA GGCCTTTTTT ATTCTCTCAG AACAAACTTT
ACCTGGGCCA GAAATACCAT CGTCGAAAAC GATGAACCCA GCCGGAAATA TGCTTACTTA
TCTGGCAAAG GCCTCCCTTT ACTACAGCCC CTGGGTTTTG TAGCAGATGG CTTCTTCTCC
AGTCTGGACG AAATTGAAAC CAGCCCAAGG CAAACATTTT CCAGGCCAAG GGTAGGAGAT
GTTAAATATA AAGACATTGA TGGTGATGGA CTAATTGATG CAAACGATCG GATCCCAATC
GGCTATGCGC GGTTGCCGCA AATGACCTTT GGCTTTGGTG GTACTGTGGC TTACAAAGGC
TTCGATGCCA GTGTATATTT TACAGGCGCA GCACAAACAA GTCTGATGTT GAGCGGAACT
TCCATGTGGC CATTCTTTGA TGGCGCAGGG GTAAACAATG TGCTGACCGA GTATTACGAC
AATCGTTGGA CTCCAGAAAA CAGGAACAAC GCACTATATC CTGCAATTGA TGAGGGTAAC
AACCCAAACA ATTTTGTCAA TTCAACCTTG TACATGCGCA ATGGCGATTA CCTGAGGTTA
CGTAATGCGG AGATCGGTTA CTCCTTACCA AAACGCTTCA ACAATAAAAT TGGCGTATCA
AATATGAGGT TATTCATAAA CGCAGTCAAT TTATATACCT GGGACCACAT TAAGATCATC
GATCCGGAAT CAAATGATGG TACTGGTGGC TATCCTTTGC AGCGATCTTT TAACGCCGGA
CTACAAATTG ACTTCAAATA A
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| Protein sequence | MITEAKAEDF FYQEARAKLI TGKVIDENKL PLIGVSVKIK GGTGGAITNA EGDFTLSVKS
EKDSIQFSYI GYKTQTISAG VTGFVTIQMT PRSKENLDEV AIVGYGTQKK VSVTGAISTI
SVSEMQKVST PSLSNAIAGK LPGIITRQAT GEPGYDAAAI YIRGLSTFGQ NAPLVLIDGV
ERDMNQINAQ EIESFTILKD ASATAVYGVR GANGVILLTT KRGSVGKPAV TFRSEAAALH
AMRLPEYINA GQYASLMNEA RINSGNSPTW SDEEIRKFKD GSDPYLYPNS NWTDAVLKKD
TWQTIQNLSV TGGSDVIKYY TNVGFTLQDG IYKQDNNNPY NTNANIKRYN FRSNVDINLS
KSLYMQLGIG GIIHKGNYPG WSAPDIFNAL KVISPIAYPV TNPDGTPGGA ATYLGWNPWA
RATQSGYTTQ DRLNLQGTFA MKWDLSSFTT KGLSLRALFA YDRYTQTDNP RRKAFLVKRY
LGKDPISGKD LYSTPFQEEQ PLGYGVGGYS NRAIYTEAQI NYERSFGKHS VTSMLLLNER
DYVDLSAGTS VANLPYRRRG LSGRTTYNYD NRYLVEFNFG YNGSENFPDG KKYGFFPAAS
AGWVVSNEKF WKVNFVSNLK IRASRGLVGN DNISQRFLFL STIRTNGQSY LFGADQQLFN
GMEEEAIGNP NVTWERATKN NIGIDLGLFK DRITLQIDAF NEDRKDILLR RGTVPDFAGF
FPWSIPYGNL GRIKNKGIDG LLEIKNTTSK GLFYSLRTNF TWARNTIVEN DEPSRKYAYL
SGKGLPLLQP LGFVADGFFS SLDEIETSPR QTFSRPRVGD VKYKDIDGDG LIDANDRIPI
GYARLPQMTF GFGGTVAYKG FDASVYFTGA AQTSLMLSGT SMWPFFDGAG VNNVLTEYYD
NRWTPENRNN ALYPAIDEGN NPNNFVNSTL YMRNGDYLRL RNAEIGYSLP KRFNNKIGVS
NMRLFINAVN LYTWDHIKII DPESNDGTGG YPLQRSFNAG LQIDFK
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