| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3400 |
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| Symbol | |
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| ID | 8254519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4045315 |
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| End bp | 4046139 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937052 |
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| Product | sugar isomerase (SIS) |
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| Protein accession | YP_003093656 |
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| Protein GI | 255533284 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2103] Predicted sugar phosphate isomerase |
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| TIGRFAM ID | [TIGR00274] N-acetylmuramic acid 6-phosphate etherase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.146498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGA CTAGAATTAC AGAACAAGCA TCGTTATATG ATCACCTGGA AACCAAATCA
GTTGAGGAGC TTACGCAATA CATCAACCAG GAAGATGCGA AGGTAGCGGC CGCAATAAAG
GTTGCCTTAC CTCAAATTAA TGTGTTGATT GAGCAGATCA TCGCAAAGCT AGCCGCTGGT
GGCCGGATGT TTTATATCGG TGCTGGAAGC GGGGGCAGAT TATCTGTCTT GGATGTGATT
GAACTGCCTA CAACTTACGG CATAGAAAAA GGAAGGGTCA ATGTGGTTTT GGCCGGTGGA
GTAGCTCAGC TGGCAGAAGC GCTTGAAGAG TGCGAAGACG ACGTAAACGA GGCTTGGACA
AAACTGAGCG AAGCACAGGT GTCGCCTATG GATATCGTGA TCGGCATTTC AGCAAGCGGC
AGTACTCCTT TTGTATTGGA AGGCTTAAAG AAATGCAGGG CAAACCAAAT CACTACAGGC
TGTATCGTCA GTAACCCTGA TTCTGGAATT GCCGCGCAGG CGGATTTTCC GGTAGAAGTG
ATCACCGGTC CTGAATTTAT TACGGGGAGT ACACGCATGA AATGCGGTAC CGCGCAGAAG
ATGATCTTCG ACATGATTTC CACCACCACC ATGATCCGTC TTGGACGTGT AGAGGGCAAC
AGCATGGTCA ACGTAAAGTT GATCAACGAT AAGATCCTGG ACCGCGCTGT TTTGATGCTG
ATGGACAAAA TTGGCCTTAC CGACTATGAA GAAGCTAAAC AGGGCTTGTT AAAATATGGT
TCGGTAAAAG AGGCTATGGA AAATTTGTCT AGTAAATCTA TTTAA
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| Protein sequence | MQMTRITEQA SLYDHLETKS VEELTQYINQ EDAKVAAAIK VALPQINVLI EQIIAKLAAG
GRMFYIGAGS GGRLSVLDVI ELPTTYGIEK GRVNVVLAGG VAQLAEALEE CEDDVNEAWT
KLSEAQVSPM DIVIGISASG STPFVLEGLK KCRANQITTG CIVSNPDSGI AAQADFPVEV
ITGPEFITGS TRMKCGTAQK MIFDMISTTT MIRLGRVEGN SMVNVKLIND KILDRAVLML
MDKIGLTDYE EAKQGLLKYG SVKEAMENLS SKSI
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