| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3395 |
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| Symbol | |
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| ID | 8254514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4038620 |
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| End bp | 4039687 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937047 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003093651 |
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| Protein GI | 255533279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAA CCATAACAAC CAGCAGTTTT TCTTTTCTTG TATTGTTCTG TTTAATTTTA
GGGCATACAG CAACGCAGGC CCAGGAAAAA AACGAAGCGC GGACCTTCGT AAATCCAGTA
GGGCAGGGCG CAGATCCCTG GGTGATCAGG CACAAAAACC ATTATTACGT TTGTCAGAGC
ACCGGAGGGA TCGCTGGTAG AGGTATTTCT GTAAGTAAAT CGGATAAACT GAGCAAGCTG
GGCAAGGCAG TTATCGTGTG GAATGCACCT CGAAAAGGCT GGAACAGCAA TCAAATCTGG
GCGCCAGAGC TCCACTATTT CAACAACAAA TGGTACATCT ATTATGCGGC AGGCCAATCT
GGCCCTCCGT ATATCTATCA GCGTTCAGGC GTACTCGAAT CAGTAACAGA TGACCCGCAG
GGAAAATATA TAGATAAAGG CCTGTTAAGC ACCGGTGCAG ACCCAAAAGA TCAAACCGGA
AATATCTGGG CCATAGATGT TAATGTAGCA GAAATCAGAG GGAAACTCTA TGCTGTATGG
TCTGGTTGGG AAAAGAATGC GGCTACCGAT AAAACAGTTC AACACCTGTA TCTGGCCAGG
ATGAGCAATC CCTGGACAAT CAGTTCAGAA AGGGTAAAAA TTTCCAGTCC TGACCAGCAA
TGGGAAACAG GCGGTCCACT GAACTTGAAC GAGGGCCCTC AGTTTCTGCT TCGTAAAGGA
CAGGTTTTTA TTGTGTATTC CACCCGCGAA TCCTGGACAC CAGAGTACCG CCTTGGCTTG
TTAAGACTTA AAAAAGAGGC CAAAGTATTG CTTGATGCGA AGAGCTGGGA AAAAACGGGA
CCTGTGTTTC AGGGAACAGA ACAAGTCTTT GGTCCTGGAC ATGCTAGTTT CACGCAATCT
CCGGATAACA AAGAATGGTG GATCTTTTAT CATGCCAAGA AAACTACAGA ACCAGGTTGG
TCGCGGGACA TGCGCTTACA AAAGTTTAGC TGGAACCCGG ATGGGAGCCC AAATTTCGGT
ACACCTATCC CGGCAGGTGT GGCCATTCAG GTACCATCCG GAGAGTAA
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| Protein sequence | MNPTITTSSF SFLVLFCLIL GHTATQAQEK NEARTFVNPV GQGADPWVIR HKNHYYVCQS
TGGIAGRGIS VSKSDKLSKL GKAVIVWNAP RKGWNSNQIW APELHYFNNK WYIYYAAGQS
GPPYIYQRSG VLESVTDDPQ GKYIDKGLLS TGADPKDQTG NIWAIDVNVA EIRGKLYAVW
SGWEKNAATD KTVQHLYLAR MSNPWTISSE RVKISSPDQQ WETGGPLNLN EGPQFLLRKG
QVFIVYSTRE SWTPEYRLGL LRLKKEAKVL LDAKSWEKTG PVFQGTEQVF GPGHASFTQS
PDNKEWWIFY HAKKTTEPGW SRDMRLQKFS WNPDGSPNFG TPIPAGVAIQ VPSGE
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