| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3393 |
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| Symbol | |
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| ID | 8254512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4036012 |
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| End bp | 4037304 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937045 |
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| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
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| Protein accession | YP_003093649 |
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| Protein GI | 255533277 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGAGC TGAGCTCAGG CAGAAGGCTA AAAGCCATCT TTGGAGGTTC GATAGGTAAC
CTGGTAGAAT GGTACGACTG GTATGCCTAT TCGGCATTTG CCATTTATTT TTCAGCTTCG
TTTTTTCCGG AGGGAAATCC AACCGTACAG TTATTGAATA CGGCCGGCAT ATTTGCATTG
GGTTTTTTAA TGCGCCCCCT GGGTGGTTAT ATCTTTGGCC GCATTGCCGA CCGTATTGGC
CGTAAGCAAT CCATGACCCT TTCTGTACTG CTGATGTCGC TGGGCTCTTT ACTAATTGCC
CTAACCCCTA CCTACCAGAC TATTGGTGTA ATGGCACCAG TACTGTTACT GACTGCCAGG
CTGCTACAAG GTTTAAGTGT TGGCGGCGAA TATGGAGTAT CGGCTACCTA TCTGAGTGAA
ATGGCGACTA AAAACCATAG GGGCTTTTAT TCCAGCTTTC AATATGTAAC TTTAATAGGT
GGCCAGCTCC TTGCCCTGGC CATCCAGCTG GTATTGCAAA AATTGCTGCT TTCAGATACA
CAATTGCACG AATGGGGCTG GCGCATCCCT TTTGTTTTTG GGGCCATACT TTCTATCGTA
GCCCTTTATC TCAGGAAAAA CCTGGACGAG ACCAAAGCTT TTGAAAACCA AAAAGAAAAT
CAATCGGGTA AAAAGGGAAC CATAAAAGAA CTGCTAAAAC ACCCTAAAGC AGTAGTTACA
GTAATTGGAC TTACTTTAGG AGGTACACTG GCCTTCTATA CCTATACCAC GTATATGCAA
AAATTCCTGG TCAATACAGT GCAGATGAGC AAAGAACAAT CAACCCTCAT GTCCTTTTTT
ACCTTATTCA TTTTCGCCTG TTTACAGCCC CTTTTTGGTG CTTTATCTGA CAGAATTGGC
CGTCGCCCAC TCCTCATCGG TTTTGGTATA CTGGGTACCA TCTGTACCGT TCCCTTACTC
AGTACGTTAA GCCATACCAC ATCACAGTGG CAGGCCTTTT TTCTTTTAAT GGCTGCCTTG
ATTATTGTAA GCGGTTATAC CAGTATCAAT GCCGTAGTAA AAGCAGAGCT GTTCCCCGCA
GAAGTAAGGG CACTTGGCGT TGGGCTTCCC TATGCTTTAA CTGTGGCTGT ATTTGGTGGC
TCGGCCGAGT ACATTGCACT CTGGTTAAAA GAACGGCAAT ATGAATCGTA TTACTACTGG
TACATTACCT GTTGTATTTT TATTTCCTTA ATGGTTTATG TTTTTATGAA AGATACCAAG
GAACATTCTA AACTGAACCA GGAAGACAAT TAA
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| Protein sequence | MKELSSGRRL KAIFGGSIGN LVEWYDWYAY SAFAIYFSAS FFPEGNPTVQ LLNTAGIFAL
GFLMRPLGGY IFGRIADRIG RKQSMTLSVL LMSLGSLLIA LTPTYQTIGV MAPVLLLTAR
LLQGLSVGGE YGVSATYLSE MATKNHRGFY SSFQYVTLIG GQLLALAIQL VLQKLLLSDT
QLHEWGWRIP FVFGAILSIV ALYLRKNLDE TKAFENQKEN QSGKKGTIKE LLKHPKAVVT
VIGLTLGGTL AFYTYTTYMQ KFLVNTVQMS KEQSTLMSFF TLFIFACLQP LFGALSDRIG
RRPLLIGFGI LGTICTVPLL STLSHTTSQW QAFFLLMAAL IIVSGYTSIN AVVKAELFPA
EVRALGVGLP YALTVAVFGG SAEYIALWLK ERQYESYYYW YITCCIFISL MVYVFMKDTK
EHSKLNQEDN
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