| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3392 |
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| Symbol | |
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| ID | 8254511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4033446 |
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| End bp | 4035947 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937044 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003093648 |
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| Protein GI | 255533276 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACT TCATCAAAAC ATTTATCACT ATGAAATCTA TTGCCTCTTT ATTGGTTTGC
CTGTTTGCCT GTATTTCATT GTCTGCACAG CAAAAAGATT CAACTGGTAA AACAGTTGCT
GTTAAGGATA CAGGAGGCAG TTTTGTGCGC AGGATGCAGG CCTTCGCCAA AGTATCGGCA
AAAAGTAGTG CAGATGATTT TGCTGCCGAC AAGGCGGCTA TAGCACAAAA CAGGATTATC
GATGAGATCA AAAAGGCCAT GCATATAGCC AAGGTCTACC TAAGTACGGG GATTGATACA
CTGGGTACAA AAGAGCAGCT GGCCAGGATT GAAAGAGACT TTACCATGGC AGGAGATGGT
GTGCTGACGA ATAAGGGAAC CGCCCAGACC TTTAGGAACC TTACTGCCAC GTCCAAAATT
TTAACTGAGT TACTGAGTAA AGCGGGCGCC AGAAAAACAA AGCTTGACTT TCACCAGCAA
CAATTGAGCA GCTTCCGGTA CCAGCTGGAC TCACTGCTGA GTGCGCCAGA CCTGTTTAAG
TTTTCGACAG ATTCTGTGGT ACTCAGCAAA TACATAGGAC AGATTGCTGT GCTTGCCCAT
GAGGTCCATC CGGTAGACAG TGCATTGAAA CAGGCTGGAA ATAATGTGCA GAGCTTACTT
AACCAGGTAA ATATGCTGGT TTTTAGACTG CAGACGGCCC TGGAAGAAAT ACAGTTGTAT
CAAAAAGATA TGGCAGGAAA TACTTTCAAA AGAGAATTTA ACAATATTTG GGAGTCACCG
GGGCATTACC GGTCATTTAA GGAAATCCTC CGGCAGGCAG AGGCAAAAGG CTTGCTTACC
CTGATATTTT ATGTCCAAAA CAATACTGGT AAGCTGGTTG TCCTTCTCTT ACTTGTTTTT
GCCTCTTTCT TTTATTTGCG TTCGTTAAAG AATATATATA GAGAGAATGG GCTGCTAACA
CCGGATCTGG AAGGGCAGCT GGTACTCCGG TATCCGCTGC TCTCGGCCCT GATTATCGTG
GTCAACCTGT TTCAGTTTAT GTTTGTCTCA TCGCCCTTCA TTTTAAACGT AGTTTTCTGG
ACAATAGCCT CGGTTAGTCT TACGCTGATA TTTAATAAAT TTATCACCCG GTACTGGATG
AGGGTTTGGC TGATGATGCT CCTGCTTTTT CTGGTCGCCG CCTTTGACAA TATGGTGCTT
CAGGCTTCAC GTACCGAGAG GTGGTTTATG TTGATCATAT CGGTAACAGG GACTATTGCT
GGAATCCTTG TATTGCTGAA AGGCCGTAAA CAGGAACTGA AGGAGAAACT GATACTTGTT
GCCATTGGCT TTATGGTTTT GCTGGAAATT GGTTCAACAC TGGCCAATGT GCTTGGAAGG
TATAACCTGT CTAAAACTTT GCTCATCAGT GGTTTTCTGA ATGTAGTGAT TGCCATCCTC
TTTTTGTGGA CCATCCGGTT GATTAATGAG GGACTTTTCC TGGCTTTCAG CGTTTATACG
CATCAGGACA AAAAGCTGTT TTACCTCAAT TTTAAAAAGG TTGGGACAAA GGCCCCGATA
CTGTTTTATT TGCTGCTTAT TGTAGGCTGG GTTGTGTTAT TTGGTCGTAA TTTTGCTGGT
TTCGATTATA TTGTAGACCC CTTTAAGGAT TTTTTTGGGC GTGAGCGTAC CATCGGTAAT
TATACTTTCA GCATCAATAC CCTGGTGTTG TTCATTGTTA TTATGACCAT TTCGGTCATT
GTATCAAAAA TCGTATCCTT TTTTGCTTCC GATCAGCACT TCAGCACCGG CAAAAATGAT
CAGGAGGAAA AGCAGGGACT TGGCAGCTGG TTGTTGCTGG TCCGTATTTC CATTCTGGCG
ATAGGCTTGT TTTTAGCTGT TGCAGCTGCT GGCATTCCGG TAGACAGGAT CACCATTGTG
CTTGGTGCCT TAGGTGTGGG TATAGGTTTT GGTCTGCAAA CGCTGGTCAA TAACCTCGTT
AGCGGGCTGA TCATTGCTTT TGAAAAACCG GTTAATGTGG GCGACATTGT AGATGTTGAC
GGTCAGGGCG GCATTGTAAA ATCGATAGGC TTCAGAAGCA GTGTAATTGC TACCTGGGAT
GGTGCCAATG TAGTGATGCC CAATGGCGAC CTGTTAAATT CCCATCTGAC CAACTGGTCG
CTGGGTGGAA ACCGGAAACG GATATCGATA CAGATTGGGA TTGCTTATGA TGCAGATCTT
GAGCAATGCC GGCAATTACT TACTGAATTG TTGAATGCAG AGCAGCGGGT AAGTAAAAAT
CCGGCTCCGG TTGTTCAGTA TGAACAGTTT AGCAGCAGTA CCATTGATGT AAAAATTTAT
TTCTGGACAA AGCATCTGGC GGAAGCTTAT GCAACAAGAA GTGCACTGAT CGTAGCGATC
AGTAATGCCT TTAAGACCAA GGGTATAGTG ATTCCATTTC CACAGCAGGA GGTTTATCAC
CACTTTCCTG ATAAGAATGA CGAAACCGGC AGGGCACTTT AG
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| Protein sequence | MLNFIKTFIT MKSIASLLVC LFACISLSAQ QKDSTGKTVA VKDTGGSFVR RMQAFAKVSA
KSSADDFAAD KAAIAQNRII DEIKKAMHIA KVYLSTGIDT LGTKEQLARI ERDFTMAGDG
VLTNKGTAQT FRNLTATSKI LTELLSKAGA RKTKLDFHQQ QLSSFRYQLD SLLSAPDLFK
FSTDSVVLSK YIGQIAVLAH EVHPVDSALK QAGNNVQSLL NQVNMLVFRL QTALEEIQLY
QKDMAGNTFK REFNNIWESP GHYRSFKEIL RQAEAKGLLT LIFYVQNNTG KLVVLLLLVF
ASFFYLRSLK NIYRENGLLT PDLEGQLVLR YPLLSALIIV VNLFQFMFVS SPFILNVVFW
TIASVSLTLI FNKFITRYWM RVWLMMLLLF LVAAFDNMVL QASRTERWFM LIISVTGTIA
GILVLLKGRK QELKEKLILV AIGFMVLLEI GSTLANVLGR YNLSKTLLIS GFLNVVIAIL
FLWTIRLINE GLFLAFSVYT HQDKKLFYLN FKKVGTKAPI LFYLLLIVGW VVLFGRNFAG
FDYIVDPFKD FFGRERTIGN YTFSINTLVL FIVIMTISVI VSKIVSFFAS DQHFSTGKND
QEEKQGLGSW LLLVRISILA IGLFLAVAAA GIPVDRITIV LGALGVGIGF GLQTLVNNLV
SGLIIAFEKP VNVGDIVDVD GQGGIVKSIG FRSSVIATWD GANVVMPNGD LLNSHLTNWS
LGGNRKRISI QIGIAYDADL EQCRQLLTEL LNAEQRVSKN PAPVVQYEQF SSSTIDVKIY
FWTKHLAEAY ATRSALIVAI SNAFKTKGIV IPFPQQEVYH HFPDKNDETG RAL
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