Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3386 |
Symbol | |
ID | 8254505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4027484 |
End bp | 4028008 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644937038 |
Product | Redoxin domain protein |
Protein accession | YP_003093642 |
Protein GI | 255533270 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.49355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TAGTAATTTC CCTTTTTTGC CTGTTGCCCT TACTGGCAAC CGCTCAGCAA AGTAAACCCG ATGAACGCGG CTATATTGTA AAGGTGGGCG ACAAGGCGCC CGACGATTTT AAGCTGGTAT TGCATACCGG CGAAACCACT AGCCTTTCCA AATTAAAGGG CAAGGTGGTT GTACTGCAAT TTACCGCCAG CTGGTGTGTG GTATGCCGGG AAGAAATGCC CCACCTGGAG CAGCAGGTAT GGCAGGCCTA TAAAAATAAA GGGCTGATGC TGATTGGTGT TGACCGTGAT GAACCGCTGA AAGTGGTACA GAAATTTGCG AAAGACATGA AAATCAGCTA CCCCCTGGCA CTGGACCCGG GCGCAGCTAT TTTTGGCCGC TTTGCAGATA AAAAGAGTGG GGTAACCCGT AATGTGGTGA TAGACCAGCA GGGTAAGATT GTTTACCTGA CCCGTTTATA TGATGAACAG GAGTTTAAAG GTATGCTTGC CGCCATTGAT AAGTTAATGA AGTAA
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Protein sequence | MKKIVISLFC LLPLLATAQQ SKPDERGYIV KVGDKAPDDF KLVLHTGETT SLSKLKGKVV VLQFTASWCV VCREEMPHLE QQVWQAYKNK GLMLIGVDRD EPLKVVQKFA KDMKISYPLA LDPGAAIFGR FADKKSGVTR NVVIDQQGKI VYLTRLYDEQ EFKGMLAAID KLMK
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