Gene Phep_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3386 
Symbol 
ID8254505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4027484 
End bp4028008 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID644937038 
ProductRedoxin domain protein 
Protein accessionYP_003093642 
Protein GI255533270 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.49355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAGTAATTTC CCTTTTTTGC CTGTTGCCCT TACTGGCAAC CGCTCAGCAA 
AGTAAACCCG ATGAACGCGG CTATATTGTA AAGGTGGGCG ACAAGGCGCC CGACGATTTT
AAGCTGGTAT TGCATACCGG CGAAACCACT AGCCTTTCCA AATTAAAGGG CAAGGTGGTT
GTACTGCAAT TTACCGCCAG CTGGTGTGTG GTATGCCGGG AAGAAATGCC CCACCTGGAG
CAGCAGGTAT GGCAGGCCTA TAAAAATAAA GGGCTGATGC TGATTGGTGT TGACCGTGAT
GAACCGCTGA AAGTGGTACA GAAATTTGCG AAAGACATGA AAATCAGCTA CCCCCTGGCA
CTGGACCCGG GCGCAGCTAT TTTTGGCCGC TTTGCAGATA AAAAGAGTGG GGTAACCCGT
AATGTGGTGA TAGACCAGCA GGGTAAGATT GTTTACCTGA CCCGTTTATA TGATGAACAG
GAGTTTAAAG GTATGCTTGC CGCCATTGAT AAGTTAATGA AGTAA
 
Protein sequence
MKKIVISLFC LLPLLATAQQ SKPDERGYIV KVGDKAPDDF KLVLHTGETT SLSKLKGKVV 
VLQFTASWCV VCREEMPHLE QQVWQAYKNK GLMLIGVDRD EPLKVVQKFA KDMKISYPLA
LDPGAAIFGR FADKKSGVTR NVVIDQQGKI VYLTRLYDEQ EFKGMLAAID KLMK